Transcript Information: R_Transcript_119091.p1


Annotated TAIR IDAT5G61980.1
Annotated Gene NameARF-GAP domain 1
Annotated Gene Symbol(s)AGD1
Annotation TypeOrtholog
Chromosome Positionchr5:24894472-24899178 | Forward length=828
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.164221961615
Replicate 28.2788262924121
Replicate 310.473983342659
Condition 2: 8 Hour
Replicate 17.90992311835
Replicate 29.4011308453441
Replicate 311.813637315881
Condition 3: 24 Hour
Replicate 110.82452431045
Replicate 28.9845057000808
Replicate 311.333775823619


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_119091.p1 GENE.R_Transcript_119091~~R_Transcript_119091.p1 ORF type:complete len:842 (+),score=152.04,BAR_3|PF16746.1|1.7e-39,ArfGap|PF01412.14|1.3e-33,Ank_5|PF13857.2|1.2e-07,Ank_5|PF13857.2|6.4e-09,Ank_2|PF12796.3|9.8e-08,Ank_2|PF12796.3|1.3e-08,PH|PF00169.25|4.5e-13,BAR|PF03114.14|1.5e-11,Ank_4|PF13637.2|2e+03,Ank_4|PF13637.2|2.7e-09,Ank_4|PF13637.2|5.8e+02,Ank|PF00023.26|7e+02,Ank|PF00023.26|3.5e-05,Ank|PF00023.26|2.2,Ank_3|PF13606.2|4.3e+02,Ank_3|PF13606.2|0.004,Ank_3|PF13606.2|5.5,Ank_3|PF13606.2|1.3e+03 R_Transcript_119091:305-2830(+)
ATGTTGTGTTACAGGCATCCTCATTGGAAACGCATGAGCGGTGGTTCAAAGATGAACTTCTCAAAGCTCGATGATTCTCCCATGTTTAGGACTCAGCTTCAGTGCTTGGAGGAGAGTGCTGAATTGTTAAAGGAGAGGAGTTTGAAGTTTTACAAAGGATGTCACAAGTACACGGAAGGTCTTGGCGAGGGTTACGATTCGAACATTTCTTTTGCAAGCGCTCTTGAAACCTTTGGAGGAGGGAATAATGATCCTTTAGGTGTTGCTTTTGGAGGCCCCATCATGACAAAGTTTACTATTGCCTTGAGAGAGATTGGTACATACAAGGAAGTTCTTCGATCTCAGGTGGAGAATTTACTGAATGTTAAGTTGCTGCAGTTTGTCAATGTCGACCTATATGATGTCAAGGAAGCTAGAAAACGCTTTGACAAGGCTACTGCTATGTATGATCAGGCACGTGAAAAGTTTTTGTCTCTGAAGAAAACTACCAGGAAAGATACAGTTGCGGCCGTAGAAGAGGAACTGCACACAGCGAGAGCTATGTATGAGCAAGCCCGTTTCAATTTGGTTGCCGCTCTTTCAACTGTTGAGGCCAAAAAACGTTACGAGTTCCTGGAAGCAGTTACCCGGGCAATGGATGCCCATCTCCATTACTTTAAGCAGGGATATGAACTGTTTCATCAGATGGAGCCTTATATCAAACAGATTCTCACCTATACGGAGCAGTCAAAACAAAGTTCAGATCATGAGCTCACATCACTTAATACAAAGATGCAGGAATACAAAAGGCAGATTGATCAGCAAAGTCGACCATCTGTAAATGGATCTTGTGATCCTCCTAAAGAGGAGGGTCCACAACCCTTATCCATAAACTCTGCAAAGACAATAGAGGAAGTTATGCAGTCTTCTGCCAATGGAAAGGTTCATATTATTCGACAAGGATATCTGTTCAAGCGTTCTTCTAATTTGAGGGGTGATTGGAAAAGGAGGTTTTTTGTTCTTGACAGTCGTGGGATGTTGTACTACTATCGCAAGCCACGAAGCAGGGCAGCTATGGCCACCAGTAAGCTGGCCAGTCCTCTTAACAGTCATTCTGATCCTGGATCAGGAGTACTTGGTCGATGGATTTCTACTCATTACCATACTGGTACTATTTACGAAGAGAAGTCTGTGGCACGTCACACTGTCAACCTGCTAACATCAACAATTAAGCCTGATGCAGAACAGTCAGATATGAGGTATTGCTTCAGGATCATATCTCCAGTCAAGACCTATACCTTACAGGCTGAGAATGCGGCCGATCAAATGGAGTGGATTGAGAAGATAAGAGGAGTAATCGCTTCATTGTTGACCTCACAGGCCATTGAAGGGCGTCTTTCAATGAGGATGGATCAAAGAGATACAGGCAGTGTAACAGATAGCTGTTCCTCTGAATGTTCTTCTACTTCCAATCCAGCAGCTACTGAAGAATGTGCATCAAATTCTAGTGGACTTCGCAGTTTCCAGCAGCAACGACATAGTATGAGACTTGAAAAACCAATTGACGTCTTGAGGAAGGTGGCTGGTAATGAAAAGTGTGCTGATTGTGGGGCTCCAGGACCAGACTGGGCATCCTTAAACCTAGGCATTCTCATTTGTATAGAATGTTCTGGTGTACATCGCAACCTTGGTGTTCATATATCAAAGGTAAGGTCACTAACATTGGATGTCAGAGTGTGGGAGCCTTCTGTCATATCTTTGTTTCAATCACTGGGTAATGTCTATGCAAATTCAGTCTGGGAAGAATTTTTGCATGCCAGAAATTTCTCTGGGGTTGATGAACGACCTGTAATTTTCCCAAAGTCAGAGGCACACAAACCGGCATTCATGAAGAAACCCACACCTAGTGATCCTGTTGCAGTAAAAGAGTTATTTATTCATGCAAAGTATGAAGAAAAAGTTTTTGTTCGCACGATGAAGGGAGCTTCACATATCTTCTCAGTGTCGCAACAGATGTGGGAAAGTGTCCGTGCCAACAATAAGAAAGCAGTTTATCGCCTCATTGTATGCTCTGGAGCAGATGTCAATGCCATGCACCGACAAGTAACATCTACTAAGTCATTTATTTTGCCAAGAGGAAGAACTCAAGGTGAGACTCCCCGAGTCCGCAACTCTGACAGATCTGAATCTGCAGATAGGTCTGCCTCTAGATCACAGAGCACACTCACCAAGGGTAAAGGCCCGTTCAGAGAAGATTCTTTTGACGATTGTTCTCTGCTTCACCTAGCCTGTCAATTCGCCGATGTAGGCATGGTGGAGCTACTCTTACAGTATGGTGCAGATATAAATGCTGTTGATTCGAAAGGCCAAACACCACTTTACCACTGTATCGTGGGGAGAAAAGCTGATATAGCAAAAGTGCTGCTCATGAGGGGAGCTAGTGCAAAGGTCAAGGATAAGGAAGGTAGATCTGCACTTCAGCTAGCTATGGATTCTGGGATAAATGACAGTGAGCTTTTGGCCCTCCTAAGAGATAATAGTAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_119091.p1 GENE.R_Transcript_119091~~R_Transcript_119091.p1 ORF type:complete len:842 (+),score=152.04,BAR_3|PF16746.1|1.7e-39,ArfGap|PF01412.14|1.3e-33,Ank_5|PF13857.2|1.2e-07,Ank_5|PF13857.2|6.4e-09,Ank_2|PF12796.3|9.8e-08,Ank_2|PF12796.3|1.3e-08,PH|PF00169.25|4.5e-13,BAR|PF03114.14|1.5e-11,Ank_4|PF13637.2|2e+03,Ank_4|PF13637.2|2.7e-09,Ank_4|PF13637.2|5.8e+02,Ank|PF00023.26|7e+02,Ank|PF00023.26|3.5e-05,Ank|PF00023.26|2.2,Ank_3|PF13606.2|4.3e+02,Ank_3|PF13606.2|0.004,Ank_3|PF13606.2|5.5,Ank_3|PF13606.2|1.3e+03 R_Transcript_119091:305-2830(+)
MLCYRHPHWKRMSGGSKMNFSKLDDSPMFRTQLQCLEESAELLKERSLKFYKGCHKYTEGLGEGYDSNISFASALETFGGGNNDPLGVAFGGPIMTKFTIALREIGTYKEVLRSQVENLLNVKLLQFVNVDLYDVKEARKRFDKATAMYDQAREKFLSLKKTTRKDTVAAVEEELHTARAMYEQARFNLVAALSTVEAKKRYEFLEAVTRAMDAHLHYFKQGYELFHQMEPYIKQILTYTEQSKQSSDHELTSLNTKMQEYKRQIDQQSRPSVNGSCDPPKEEGPQPLSINSAKTIEEVMQSSANGKVHIIRQGYLFKRSSNLRGDWKRRFFVLDSRGMLYYYRKPRSRAAMATSKLASPLNSHSDPGSGVLGRWISTHYHTGTIYEEKSVARHTVNLLTSTIKPDAEQSDMRYCFRIISPVKTYTLQAENAADQMEWIEKIRGVIASLLTSQAIEGRLSMRMDQRDTGSVTDSCSSECSSTSNPAATEECASNSSGLRSFQQQRHSMRLEKPIDVLRKVAGNEKCADCGAPGPDWASLNLGILICIECSGVHRNLGVHISKVRSLTLDVRVWEPSVISLFQSLGNVYANSVWEEFLHARNFSGVDERPVIFPKSEAHKPAFMKKPTPSDPVAVKELFIHAKYEEKVFVRTMKGASHIFSVSQQMWESVRANNKKAVYRLIVCSGADVNAMHRQVTSTKSFILPRGRTQGETPRVRNSDRSESADRSASRSQSTLTKGKGPFREDSFDDCSLLHLACQFADVGMVELLLQYGADINAVDSKGQTPLYHCIVGRKADIAKVLLMRGASAKVKDKEGRSALQLAMDSGINDSELLALLRDNSR*

Click here to download the sequence:
Link to NCBI Protein BLAST