Transcript Information: R_Transcript_119179.p1


Annotated TAIR IDAT5G15630.1
Annotated Gene NameCOBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family
Annotated Gene Symbol(s)COBL4, IRX6
Annotation TypeOrtholog
Chromosome Positionchr5:5084842-5086545 | Forward length=431
E-Value2.5E-275
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.9145860604346
Replicate 23.5594586542651
Replicate 34.1291114980189
Condition 2: 8 Hour
Replicate 13.8883133178029
Replicate 24.2706405233166
Replicate 36.4270724299653
Condition 3: 24 Hour
Replicate 17.3898521119219
Replicate 25.0641903461197
Replicate 35.542380156768


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_119179.p1 GENE.R_Transcript_119179~~R_Transcript_119179.p1 ORF type:complete len:466 (+),score=29.83,COBRA|PF04833.11|1.4e-70 R_Transcript_119179:321-1718(+)
ATGGGGTGTAAAATATTAGCACAGTTAACTCAAAAACATTTGTCCCAAGCAAGAAATCCACAATGCCAATGTCGCCATGTTCTTGCAGGTGCAATTCATCTGAAGTTCACTCTATCGGCAATCTTGGCTGTTCTTATGCTATCTTCTCGTACAGAGGCATATGACCCATTAGATCCGGCTGGGAACGTAACAATCAAGTGGGATGTCATGTCTTGGACACCCGACGGATATGTGGCAGTCGTGACGATGAATAACTTCCAAATGTTTCGACACATACAATCCCCTGGCTGGACGCTAGGGTGGTCGTGGGCAAAGAAAGAAGTGATATGGTCAATGGTGGGAGCACAAACCACAGAGCAAGGTGACTGTTCCAAGTTTAAGGCAAACATACCACACTGCTGTAAGAAGACTCCTACAGTTGTTGACCTGCTACCTGGGGTACCCTACAACCAACAGTTTACCAATTGTTGCAAGGGAGGGGTGCTTTCAGCATGGGGGCAGGATCCTGAGGGGTCTATCTCCGCTTTCCAGGTCAGTATCGGCCAGGCTGGCACATCAAACAAGACGGTGAAGCTGCCGAAGAACTTCACCTTGCTCGGCCCTGGACCTGGCTATACTTGTGGCCCTGCAAAAGTAGTGCCGTCAACAGTCTTCCTCACTCCTGATCGAAGGAGGAAAACTCAGGCACTTATGACATGGAACGTAACGTGCACTTATTCACAGTTCATGGCCTCAAAAAACCCAGCGTGTTGTGTTTCCTTCTCGTCTTTCTACAATGACACAATCATTCCTTGCCCATCATGTTCTTGTGGCTGCCACAACAAAGACAGCTGTATCAAAAGCAACTCAAAGAGAGCGCATACAGCCGGAATAAATACTCCAAAGAAGGACAATTCTCCTCTTCTACAATGCACACTTCATATGTGCCCTATTCGAATTCACTGGCACATCAAGGTAAACTACAAGGATTACTGGCGTGCCAAGGTAGCCATTACCAATTTCAATTATCGCATGAACTATACCCAGTGGACCTTGGTGGTACAGCATCCCAACCTCAACAACGTCACCCAAGTTTTCAGCTTCAACTACAAGCCTCTGGTACCTTACGCGTCTGTCAATGATACTGGTATGTTCTATGGTACGAAGTTCTACAACGATCTGTTAATGGAAGCAGGGTCCTATGGAAATGTTCAGTCTGAAGTGCTTCTACAGAAAGACCAAAACACATTCACCTTAAAGCAGGGGTGGGCATTTCCTAGGAGAGTCTACTTCAATGGGGATGAATGCAGGCTTCCACCTCCAGATACATACCCATTTCTCCCCAATTATGCTAGTGCTATTTCAGTTGCTTATTTAACTGTAGCTTCAACCCTGGCTTTAACAGTGCTACTTATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_119179.p1 GENE.R_Transcript_119179~~R_Transcript_119179.p1 ORF type:complete len:466 (+),score=29.83,COBRA|PF04833.11|1.4e-70 R_Transcript_119179:321-1718(+)
MGCKILAQLTQKHLSQARNPQCQCRHVLAGAIHLKFTLSAILAVLMLSSRTEAYDPLDPAGNVTIKWDVMSWTPDGYVAVVTMNNFQMFRHIQSPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKANIPHCCKKTPTVVDLLPGVPYNQQFTNCCKGGVLSAWGQDPEGSISAFQVSIGQAGTSNKTVKLPKNFTLLGPGPGYTCGPAKVVPSTVFLTPDRRRKTQALMTWNVTCTYSQFMASKNPACCVSFSSFYNDTIIPCPSCSCGCHNKDSCIKSNSKRAHTAGINTPKKDNSPLLQCTLHMCPIRIHWHIKVNYKDYWRAKVAITNFNYRMNYTQWTLVVQHPNLNNVTQVFSFNYKPLVPYASVNDTGMFYGTKFYNDLLMEAGSYGNVQSEVLLQKDQNTFTLKQGWAFPRRVYFNGDECRLPPPDTYPFLPNYASAISVAYLTVASTLALTVLLI*

Click here to download the sequence:
Link to NCBI Protein BLAST