Transcript Information: R_Transcript_119195.p1


Annotated TAIR IDAT5G16420.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5368034-5369641 | Forward length=535
E-Value2E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.4758882864156
Replicate 23.6743525728522
Replicate 35.5357949190702
Condition 2: 8 Hour
Replicate 13.8769286166472
Replicate 24.4721763682371
Replicate 36.504327138972
Condition 3: 24 Hour
Replicate 15.1655066262334
Replicate 24.4110517781155
Replicate 36.7487089451267


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_119195.p1 GENE.R_Transcript_119195~~R_Transcript_119195.p1 ORF type:5prime_partial len:120 (-),score=28.71,PPR_2|PF13041.2|8.5e-10,PPR_2|PF13041.2|9.9e-16,PPR_2|PF13041.2|9.1e+03,PPR_1|PF12854.3|2.4e-13,PPR_1|PF12854.3|0.11,PPR|PF01535.16|4.5e+02,PPR|PF01535.16|1.5e-08,PPR|PF01535.16|69,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|6.4e-05,PPR_3|PF13812.2|2.3e+03 R_Transcript_119195:140-499(-)
TGGGATGATATGGTCGAGAAAGGTTGTCGTCCTAACACTTTTACTTATAATGTGTTGATTAGGGGTTTTTGTAAGATTGGGAATCCCAAGGAGGGCATGAGGGTTTTGGATGAGATGTTTGCCAGAAGATGTTTTCCTAATGAAACGACTTATATGATATTGATTGAGGGGCTGTTAGCCTTAGAATTGGATGCTGAAGTCATGGAGTTGCTTTATGTGGTTGTTAGCAAGGGAGGAAAGATTGATGCAAGTTCATGGAAAGTTCTTCTCACCCACACTCTTGTTGATGTGGATACCGGCGCAGCTCTTGACAGTATCCTGCCCAAGAATGAGCATCATGACTCAATTCTTGCAGTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_119195.p1 GENE.R_Transcript_119195~~R_Transcript_119195.p1 ORF type:5prime_partial len:120 (-),score=28.71,PPR_2|PF13041.2|8.5e-10,PPR_2|PF13041.2|9.9e-16,PPR_2|PF13041.2|9.1e+03,PPR_1|PF12854.3|2.4e-13,PPR_1|PF12854.3|0.11,PPR|PF01535.16|4.5e+02,PPR|PF01535.16|1.5e-08,PPR|PF01535.16|69,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|6.4e-05,PPR_3|PF13812.2|2.3e+03 R_Transcript_119195:140-499(-)
WDDMVEKGCRPNTFTYNVLIRGFCKIGNPKEGMRVLDEMFARRCFPNETTYMILIEGLLALELDAEVMELLYVVVSKGGKIDASSWKVLLTHTLVDVDTGAALDSILPKNEHHDSILAV*

Click here to download the sequence:
Link to NCBI Protein BLAST