Transcript Information: R_Transcript_119317.p2


Annotated TAIR IDAT5G04050.2
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1096092-1098512 | Forward length=695
E-Value2E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.73998490356968
Replicate 20.66204550862201
Replicate 30.7222845187976
Condition 2: 8 Hour
Replicate 11.4338569563702
Replicate 20.50362346489157
Replicate 31.6352802360709
Condition 3: 24 Hour
Replicate 11.5512031910611
Replicate 20.69543609114433
Replicate 30.69015285048775


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_119317.p2 GENE.R_Transcript_119317~~R_Transcript_119317.p2 ORF type:complete len:222 (+),score=22.86 R_Transcript_119317:541-1206(+)
ATGCTCTTTCCTCTAACAAAGAAAATCATTCCAACCAGACCAACTACAAAATCATCACCATCATCGATTCTCTCTTCTTTCTCTTTCCTTTACTCAACTCTTTCTCATTCTCAAACCCTTTCCTTTGACACTCCAAACTCCACCACCACCTTAAACCCTCCCAAAACCCTAACCCAAACCCACCTCAAAACCCTAATCCTCTCGCACTACCACCATGGCAAATTCCATAACCTCCTCCAAAACGTCGTTGCTTCGCCTTCTGTCCTCTTCACTTCCTCCCAAAACCTCTCAACTCGCTCCCCCCAACTTACCCTTGACTCACTCTCCCCTCATTTTGACCTCCGCCAACTTTCCCAAGATCTCACCTTTAACACCTTTGACCCCAAACCCTGTTGTGTTAGATTACAGCCCACTTGTAACAATCAAGCTAGGTCCCTTGTGTTGCCTAATTTGAAGCTTAAAGTTGTTATTGAAGCCTTGAGATTGGTTCTTGATGCTGTCTTTGATGGTGGGTTCACCACCTTTTGTTATGGTGGGGGCCGGGCCGTCACACTGCCATTCGATACCTTAAGAACACTGTTGAGAACCCCAGTTGGTGGTTCACTGTTTCATTTCATCATAGCGCTTTGTTTGAATCTGGGCATGTGGGTAGGTTGTGTAGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_119317.p2 GENE.R_Transcript_119317~~R_Transcript_119317.p2 ORF type:complete len:222 (+),score=22.86 R_Transcript_119317:541-1206(+)
MLFPLTKKIIPTRPTTKSSPSSILSSFSFLYSTLSHSQTLSFDTPNSTTTLNPPKTLTQTHLKTLILSHYHHGKFHNLLQNVVASPSVLFTSSQNLSTRSPQLTLDSLSPHFDLRQLSQDLTFNTFDPKPCCVRLQPTCNNQARSLVLPNLKLKVVIEALRLVLDAVFDGGFTTFCYGGGRAVTLPFDTLRTLLRTPVGGSLFHFIIALCLNLGMWVGCVV*

Click here to download the sequence:
Link to NCBI Protein BLAST