Transcript Information: R_Transcript_119317.p3


Annotated TAIR IDAT5G04050.2
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1096092-1098512 | Forward length=695
E-Value1.3E-72
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3808209940937
Replicate 22.6245375520373
Replicate 31.1204382519857
Condition 2: 8 Hour
Replicate 10.79845211784495
Replicate 21.2152653174557
Replicate 30.88785051947545
Condition 3: 24 Hour
Replicate 10
Replicate 21.678117524283
Replicate 31.9032786684259


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_119317.p3 GENE.R_Transcript_119317~~R_Transcript_119317.p3 ORF type:complete len:184 (+),score=47.53 R_Transcript_119317:1344-1895(+)
ATGAATATATACTTGAATGGATTTGATAAGAAGTTACAAAAGATTCGCCTTCGGATGAATGAGGAGAATCCTAAGGTTGATGATGTGAGTAGTGTTGTTGTGTATAAGCCTGTGAAGGTGTATGCTGTACGGTACTTGAACGAGGTGCTGGTGATCACGTCTGGATCAAAGGTTTTAGCAGTGGATTTGTTGAATTGGGTTGTGAAGTACTTGGAGAATGAATTGGATTTGAAGGTGGATAGGTTGAGGACATCGATTCATAGTGCTGTTTCAGAGAAGATTGGTTTTTTGGGGATGGAACTTCAGGCTGTTCCGCCATCAGTCTTGAGGCCTCCCCTTTCGGAGAAAGCAATAAGGGCGAGGAAGAAGTACCGTAGGCAAAAGCAAGTTAGGTTATTGGAGTTGAGAAATGCGAGGGAGAGGAATCGGAGGAAGTTGGGGATGAAACTATTTAGTCATGTTTTTAAGAAGATCAAACAGAGTGGTGGGTTTTTAAGAAGATCAAACAGAGTGGTGGGTTCAAGTTTGAGTACCAGATTGAAGATGAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_119317.p3 GENE.R_Transcript_119317~~R_Transcript_119317.p3 ORF type:complete len:184 (+),score=47.53 R_Transcript_119317:1344-1895(+)
MNIYLNGFDKKLQKIRLRMNEENPKVDDVSSVVVYKPVKVYAVRYLNEVLVITSGSKVLAVDLLNWVVKYLENELDLKVDRLRTSIHSAVSEKIGFLGMELQAVPPSVLRPPLSEKAIRARKKYRRQKQVRLLELRNARERNRRKLGMKLFSHVFKKIKQSGGFLRRSNRVVGSSLSTRLKMK*

Click here to download the sequence:
Link to NCBI Protein BLAST