Transcript Information: R_Transcript_11936.p1


Annotated TAIR IDAT1G27530.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-fold modifier-conjugating enzyme 1 (InterPro:IPR014806); Has 269 Blast hits to 269 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9562761-9563887 | Reverse length=174
E-Value8.4E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.55312002893087
Replicate 20.3181257638833
Replicate 30.17353589087994
Condition 2: 8 Hour
Replicate 11.1129938612384
Replicate 20.50820186002695
Replicate 30.68756100834799
Condition 3: 24 Hour
Replicate 10.52176834608418
Replicate 20.66834117850234
Replicate 30.49744783379312


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_11936.p1 GENE.R_Transcript_11936~~R_Transcript_11936.p1 ORF type:internal len:132 (+),score=11.42,UFC1|PF08694.7|3.3e-08 R_Transcript_11936:2-394(+)
AACTCCTCGTTCTCACACCCATCCTCTCACCCCAAATACTCCTCACCCCAAACCCCACCCCACTTCATCCTCTATCTTGCCTCCAATTCCTTTTCCGGTCAGGGAGATACTTCCGTCAGGCGAGAGACTTCTGGTCAGGCGAGAGAATTCGTTCTCCTTCAGCTCGCCTCCAATTCGTTCTCCTTCATCTCAGGCGAAAAACCCAGCTCCTCCAATTCCTCCCTTCCCTTCACACTCCGGCTTTCAGGCGAGGAATCTTCAGTCAGGCGACGTTCGTCCAGCGGCACCACCCTCACCATTGCTGCCTTCCCACTTCCAAGTTCAGGCCCTAGGTTTGGAATAGCTCATGCTCTCTGTTTTGGTCTTGCCCCATGGCTTGCGGCCGAGATTCCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_11936.p1 GENE.R_Transcript_11936~~R_Transcript_11936.p1 ORF type:internal len:132 (+),score=11.42,UFC1|PF08694.7|3.3e-08 R_Transcript_11936:2-394(+)
NSSFSHPSSHPKYSSPQTPPHFILYLASNSFSGQGDTSVRRETSGQAREFVLLQLASNSFSFISGEKPSSSNSSLPFTLRLSGEESSVRRRSSSGTTLTIAAFPLPSSGPRFGIAHALCFGLAPWLAAEIP

Click here to download the sequence:
Link to NCBI Protein BLAST