Transcript Information: R_Transcript_11939.p1


Annotated TAIR IDAT1G27530.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-fold modifier-conjugating enzyme 1 (InterPro:IPR014806); Has 269 Blast hits to 269 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9562761-9563887 | Reverse length=174
E-Value5.8E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.2590242227677
Replicate 22.7995067221731
Replicate 32.2906737596152
Condition 2: 8 Hour
Replicate 12.6526353692849
Replicate 23.3541322761778
Replicate 33.4790587022408
Condition 3: 24 Hour
Replicate 14.9741915660026
Replicate 22.7569073613222
Replicate 33.830348320207


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_11939.p1 GENE.R_Transcript_11939~~R_Transcript_11939.p1 ORF type:internal len:120 (+),score=6.29,UFC1|PF08694.7|2.9e-08 R_Transcript_11939:1-357(+)
TCACCCCAAAACTCCTCCTCACCGCAAACCCCACCCTACTTCATCCTCTATCTCGCCTCCAATTCGTTTTCCGGTCAGGGAGATACTTCCGGTCAGGCGAGAGAATTCGTTCTCTTTAATATCGCCTTCACTTCGTTCTCCTTCATCTCAGGCGAGAAACCCAGCTTCTGTGTGTTTCGTTCCTCCCTTCCCTTCACACTCCGGCTTTCAGGCGAGGAATCTTCAGTCAGGCGACGTTCGTCCAGCGGCACCACCCTCACCATTGCTGCCTTCCCACTTCCAAGTTCAGGCCCTAGGTTTGGAATAGCTCATGCTCTCTGTTTTGGTCTTGCCCCATGGCTTGCGGCCGAGATTCCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_11939.p1 GENE.R_Transcript_11939~~R_Transcript_11939.p1 ORF type:internal len:120 (+),score=6.29,UFC1|PF08694.7|2.9e-08 R_Transcript_11939:1-357(+)
SPQNSSSPQTPPYFILYLASNSFSGQGDTSGQAREFVLFNIAFTSFSFISGEKPSFCVFRSSLPFTLRLSGEESSVRRRSSSGTTLTIAAFPLPSSGPRFGIAHALCFGLAPWLAAEIP

Click here to download the sequence:
Link to NCBI Protein BLAST