Transcript Information: R_Transcript_119408.p1


Annotated TAIR IDAT4G38140.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:17899868-17900305 | Reverse length=145
E-Value6.3E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.356866382477
Replicate 21.8100258979567
Replicate 31.974718758289
Condition 2: 8 Hour
Replicate 10.84434017059466
Replicate 20.64255407589614
Replicate 30.93887641139933
Condition 3: 24 Hour
Replicate 11.055531366791
Replicate 20.3802630843203
Replicate 30.37737421873961


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_119408.p1 GENE.R_Transcript_119408~~R_Transcript_119408.p1 ORF type:complete len:174 (+),score=19.65,zf-RING_2|PF13639.2|3.2e+03,zf-RING_2|PF13639.2|6.9e-13,zf-RING_2|PF13639.2|1.5e+04,zf-rbx1|PF12678.3|2.4e+03,zf-rbx1|PF12678.3|2.1e-09,zf-C3HC4|PF00097.21|2.1e-09,zf-C3HC4|PF00097.21|2.8e+03,zf-RING_11|PF17123.1|4.5e-08,zf-C3HC4_2|PF13923.2|3.6e-07,zf-C3HC4_2|PF13923.2|9.9e+03,zf-RING_5|PF14634.2|1.8e-06,zf-RING_5|PF14634.2|8e+03,zf-ANAPC11|PF12861.3|2.7e+03,zf-ANAPC11|PF12861.3|1.9e-06,zf-RING_UBOX|PF13445.2|7.6e-06 R_Transcript_119408:88-609(+)
ATGATATTCTTTGTATACCAATCCAAGTTATGTATGGCCACCCTTGTTTTCTACACTTGTATTTACTTACCATTCCTACAAATGAAACGAGCTATTCTTAGCATCATAGGCTACATTCTTTGCATATATCACCACCCCTTAGACTGGTCGAATTCGAGCTCGGATTGCTCGGTGATGGGGGACGATGAGTCTATGGAAACAACATGCTCTTTGGATCTTCCAATGAGTAGATATGGAGATTTGAAGAACATCAATGGATGCAATAAGAAGTTCACTGAGGGTGATCATGAAGATGATGATGATCATGAAGAAACATGCTCGGTTTGTTTGGTTGAGTTTGAGAGTGAAGATATGGTGACCAAGCTATCTAAATGTGGTCATTTATTCCACATGGTGTGCATCGACAAATGGGTTGAGAAGAACCAGTTTACTTGCCCTCTTTGTAGGTCTATGTTCTTGAATGTGCATGGAGGTAGCCATGCAACATGCAATAGCACCATGATTTCTTGCATTTCTAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_119408.p1 GENE.R_Transcript_119408~~R_Transcript_119408.p1 ORF type:complete len:174 (+),score=19.65,zf-RING_2|PF13639.2|3.2e+03,zf-RING_2|PF13639.2|6.9e-13,zf-RING_2|PF13639.2|1.5e+04,zf-rbx1|PF12678.3|2.4e+03,zf-rbx1|PF12678.3|2.1e-09,zf-C3HC4|PF00097.21|2.1e-09,zf-C3HC4|PF00097.21|2.8e+03,zf-RING_11|PF17123.1|4.5e-08,zf-C3HC4_2|PF13923.2|3.6e-07,zf-C3HC4_2|PF13923.2|9.9e+03,zf-RING_5|PF14634.2|1.8e-06,zf-RING_5|PF14634.2|8e+03,zf-ANAPC11|PF12861.3|2.7e+03,zf-ANAPC11|PF12861.3|1.9e-06,zf-RING_UBOX|PF13445.2|7.6e-06 R_Transcript_119408:88-609(+)
MIFFVYQSKLCMATLVFYTCIYLPFLQMKRAILSIIGYILCIYHHPLDWSNSSSDCSVMGDDESMETTCSLDLPMSRYGDLKNINGCNKKFTEGDHEDDDDHEETCSVCLVEFESEDMVTKLSKCGHLFHMVCIDKWVEKNQFTCPLCRSMFLNVHGGSHATCNSTMISCISS*

Click here to download the sequence:
Link to NCBI Protein BLAST