Transcript Information: R_Transcript_119412.p1


Annotated TAIR IDAT4G11370.1
Annotated Gene NameRING-H2 finger A1A
Annotated Gene Symbol(s)RHA1A
Annotation TypeOrtholog
Chromosome Positionchr4:6907777-6908256 | Forward length=159
E-Value5.3E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.939927862992
Replicate 24.3742292533954
Replicate 36.3232140239379
Condition 2: 8 Hour
Replicate 11.2753054660023
Replicate 21.5140180413303
Replicate 32.6471098821398
Condition 3: 24 Hour
Replicate 12.2718663402416
Replicate 24.2502321820383
Replicate 33.1919569335059


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_119412.p1 GENE.R_Transcript_119412~~R_Transcript_119412.p1 ORF type:5prime_partial len:192 (+),score=16.69,zf-RING_2|PF13639.2|5.7e+03,zf-RING_2|PF13639.2|7.6e-13,zf-rbx1|PF12678.3|1.7e-09,zf-C3HC4|PF00097.21|1.4e-09,zf-C3HC4|PF00097.21|3.2e+03,zf-RING_11|PF17123.1|3.9e-08,zf-C3HC4_2|PF13923.2|7.1e-07,zf-C3HC4_2|PF13923.2|1.4e+04,zf-ANAPC11|PF12861.3|2.8e+03,zf-ANAPC11|PF12861.3|1.7e-06,zf-RING_5|PF14634.2|2.1e-06,zf-RING_5|PF14634.2|9e+03,zf-RING_UBOX|PF13445.2|5.7e-06 R_Transcript_119412:2-577(+)
AAAATTGCAAACATACAGAAACCCACAAACACAATCCTTCTATACTTGCACAAAATCAAAACACAAACAAAAATGATATTCTTTGTATACCAATCCAAGTTATGTATGGCCACCCTTGTTTTCTACACTTGTATTTACTTACCATTCCTACAAATGAAACGAGCTATTCTTAGCATCATAGGCTACATTCTTTGCATATATCACCACCCCTTAGACTGGTCGAATTCGAGCTCGGATTGCTCGGTGATGGGGGACGATGAGTCTATGGAAACAACATGCTCTTTGGATCTTCCAATGAGTAGATATGGAGATTTGAAGAACATCAATGGATGCAATAAGAAGTTCACTGAGGGTGATCATGATGAAACATGCTCGGTTTGTTTGGTTGAGTTTGAGAGTGAAGATATGGTGAGCAAGCTATCTAAATGTGGTCATGTATTCCACATGGTGTGCATTGACAAATGGGTTGAGAGGAACCAGTTTACTTGCCCTCTTTGTAGGTCTATGTTCTTGAATGTGCATGGAGGTAGCCATGCAACATGCAATAGCACCATGATTTCTTGCATTTCTAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_119412.p1 GENE.R_Transcript_119412~~R_Transcript_119412.p1 ORF type:5prime_partial len:192 (+),score=16.69,zf-RING_2|PF13639.2|5.7e+03,zf-RING_2|PF13639.2|7.6e-13,zf-rbx1|PF12678.3|1.7e-09,zf-C3HC4|PF00097.21|1.4e-09,zf-C3HC4|PF00097.21|3.2e+03,zf-RING_11|PF17123.1|3.9e-08,zf-C3HC4_2|PF13923.2|7.1e-07,zf-C3HC4_2|PF13923.2|1.4e+04,zf-ANAPC11|PF12861.3|2.8e+03,zf-ANAPC11|PF12861.3|1.7e-06,zf-RING_5|PF14634.2|2.1e-06,zf-RING_5|PF14634.2|9e+03,zf-RING_UBOX|PF13445.2|5.7e-06 R_Transcript_119412:2-577(+)
KIANIQKPTNTILLYLHKIKTQTKMIFFVYQSKLCMATLVFYTCIYLPFLQMKRAILSIIGYILCIYHHPLDWSNSSSDCSVMGDDESMETTCSLDLPMSRYGDLKNINGCNKKFTEGDHDETCSVCLVEFESEDMVSKLSKCGHVFHMVCIDKWVERNQFTCPLCRSMFLNVHGGSHATCNSTMISCISS*

Click here to download the sequence:
Link to NCBI Protein BLAST