Transcript Information: R_Transcript_119419.p1


Annotated TAIR IDAT5G47500.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19271262-19272845 | Reverse length=362
E-Value3E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.20281067727465
Replicate 20.23329222684776
Replicate 30.25451930662392
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.25508674697449
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_119419.p1 GENE.R_Transcript_119419~~R_Transcript_119419.p1 ORF type:5prime_partial len:90 (+),score=6.47,Pectinesterase|PF01095.15|8e-11 R_Transcript_119419:1-270(+)
AAGAGAGTTATCTTAGATATTAAGCCTGGTGTGTACAGGGAAAAAATACACATCCCTAAAACAAAGCCATTCATTACATTGTTGGGAGACCCGGGAAACCCACCAACCATCACGGGAAATGACACGGCCTCTATCATCCGAGGAGACGGCACGCGCTTGCGGACCTTCTTTAGCGCTACCGTTGCTGTTGATGCTTTCTACTTTGTTGCCCTCAACATCATATTTGAGAAGCAAAAGTTGTTGGAAGTATATAATATGGTAATGGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_119419.p1 GENE.R_Transcript_119419~~R_Transcript_119419.p1 ORF type:5prime_partial len:90 (+),score=6.47,Pectinesterase|PF01095.15|8e-11 R_Transcript_119419:1-270(+)
KRVILDIKPGVYREKIHIPKTKPFITLLGDPGNPPTITGNDTASIIRGDGTRLRTFFSATVAVDAFYFVALNIIFEKQKLLEVYNMVMV*

Click here to download the sequence:
Link to NCBI Protein BLAST