Transcript Information: R_Transcript_119421.p2


Annotated TAIR IDAT5G47500.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19271262-19272845 | Reverse length=362
E-Value3E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4857061242213
Replicate 20.73242908428947
Replicate 30.26635741390875
Condition 2: 8 Hour
Replicate 10.28471935985169
Replicate 20.26001025396727
Replicate 30.42213047954388
Condition 3: 24 Hour
Replicate 10.53390249366754
Replicate 20
Replicate 31.2725409701685


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_119421.p2 GENE.R_Transcript_119421~~R_Transcript_119421.p2 ORF type:5prime_partial len:86 (+),score=7.07,Pectinesterase|PF01095.15|6.1e-12 R_Transcript_119421:1-258(+)
AAGAGAGTTATCTTAGATATTAAGCCTGGTGTGTACAGGGAAAAAATACACATCCCTAAAACAAAGCCATTCATTACATTGTTGGGAGACCCGGGAAACCCACCAACCATCACGGGAAATGACACGGCCTCTATCATCCGAGGAGACGGCACGCGCTTGCGGACCTTCTTTAGCGCTACCGTTGCTGTTGATGCTTTCTACTTTGTTGCCCTCAACATCATATTTGAGGATCATATGGGGAGCAGGCAGTGGCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_119421.p2 GENE.R_Transcript_119421~~R_Transcript_119421.p2 ORF type:5prime_partial len:86 (+),score=7.07,Pectinesterase|PF01095.15|6.1e-12 R_Transcript_119421:1-258(+)
KRVILDIKPGVYREKIHIPKTKPFITLLGDPGNPPTITGNDTASIIRGDGTRLRTFFSATVAVDAFYFVALNIIFEDHMGSRQWP*

Click here to download the sequence:
Link to NCBI Protein BLAST