Transcript Information: R_Transcript_119422.p1


Annotated TAIR IDAT5G19730.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6670562-6673202 | Forward length=383
E-Value5E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.504691540227
Replicate 24.6573611832516
Replicate 36.2472920716779
Condition 2: 8 Hour
Replicate 12.6711852669722
Replicate 24.7974255586544
Replicate 33.564316267276
Condition 3: 24 Hour
Replicate 17.0960495067449
Replicate 23.7694442467532
Replicate 34.2979492839726


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_119422.p1 GENE.R_Transcript_119422~~R_Transcript_119422.p1 ORF type:5prime_partial len:275 (+),score=21.14,Pectinesterase|PF01095.15|5.1e-62 R_Transcript_119422:1-825(+)
AAGAGAGTTATCTTAGATATTAAGCCTGGTGTGTACAGGGAAAAAATACACATCCCTAAAACAAAGCCATTCATTACATTGTTGGGAGACCCGGGAAACCCACCAACCATCACGGGAAATGACACGGCCTCTATCATCCGAGGAGACGGCACGCGCTTGCGGACCTTCTTTAGCGCTACCGTTGCTGTTGATGCTTTCTACTTTGTTGCCCTCAACATCATATTTGAGAATACGGCTCCACACGTAATAGGATCATATGGGGAGCAGGCAGTGGCCTTGAGGATATCCGGCAGCAAAGCGGCATTTTATAATTGCAGCTTCTATGGGTCTCAAGACACACACTATGATCACAAAGGTCTTCACTATTTCCACAATTGCTTTATCCAAGGTTCCGTTGATTTCATCTTTGGCTATGGCAGATCCCTTTATGAGAATTGCACATTGAACTCAATAGCAAAGAAGGTGGCATCAGTGACAGCACAAAAGCGGACAGCATCCTCACTGTCAAGTGGATTCTCATTTAAAGACTGTAAAGTGACAGGAAGTGGGTTGGTTTACTTGGGCAGAGCATGGGGTGATTATTCCAGGGTCGTTTTCTCTTTCACTTTCATGGACAAACTTGTTCTCCCTCTAGGCTGGAGCAACTGGGCCCACCCCAACAGAAATTTGAGTGTATACTATGGTGAGTACAAATGTAGTGGACCTGGATCTAGCATGAAAAGTAGGGTGCCTTGGGCTCGGGCCCTCACGGACCAAGAGGTTGAACCTTTTATTGGACCACATTACATAGAGGGCGACACCTGGCTCATGAGCCCATCAACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_119422.p1 GENE.R_Transcript_119422~~R_Transcript_119422.p1 ORF type:5prime_partial len:275 (+),score=21.14,Pectinesterase|PF01095.15|5.1e-62 R_Transcript_119422:1-825(+)
KRVILDIKPGVYREKIHIPKTKPFITLLGDPGNPPTITGNDTASIIRGDGTRLRTFFSATVAVDAFYFVALNIIFENTAPHVIGSYGEQAVALRISGSKAAFYNCSFYGSQDTHYDHKGLHYFHNCFIQGSVDFIFGYGRSLYENCTLNSIAKKVASVTAQKRTASSLSSGFSFKDCKVTGSGLVYLGRAWGDYSRVVFSFTFMDKLVLPLGWSNWAHPNRNLSVYYGEYKCSGPGSSMKSRVPWARALTDQEVEPFIGPHYIEGDTWLMSPST*

Click here to download the sequence:
Link to NCBI Protein BLAST