Transcript Information: R_Transcript_119432.p1


Annotated TAIR IDAT5G16680.1
Annotated Gene NameRING/FYVE/PHD zinc finger superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5467534-5472956 | Reverse length=1311
E-Value7E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0495452548963
Replicate 20.73487051457043
Replicate 30.34360106394229
Condition 2: 8 Hour
Replicate 10.42850263657679
Replicate 20.78263086444149
Replicate 31.40674982308
Condition 3: 24 Hour
Replicate 10.74612873490038
Replicate 20.3859670305851
Replicate 30.60191187888968


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_119432.p1 GENE.R_Transcript_119432~~R_Transcript_119432.p1 ORF type:3prime_partial len:400 (+),score=87.16,PHD|PF00628.25|5.2e+03,PHD|PF00628.25|9.5e-07 R_Transcript_119432:184-1380(+)
ATGTTTGGCAATTTAGCTACTGTTCCTTCTCCATCTATTGAGCACTTTGAGATATTTAAGTCTGCAATGGAGAAAGAGGCTGTTGGCTCGTCTGAAACCTGCATGGGGGAGGAAACTGTTCATCAAGCTTCAGTTGACAGTCACCGGGGACTAGCAAGTAGTGAAACAAGTAATATTCATAGCGCGTCTGCCTGTCAGAGCTCATTGTCTGAAGATGTTCTGAGTTGCAATTCACTAAAGGGCCATAGCATCTCTGACGATCAACAAAAGTCTCAAAATGTTAATACTTGCCAGAATGCAGTAGGACACCCGGATGAAGATGTATTAAACCTCCAAGCTGATGGCAGCTCTTGTGTTAGCAAGGATAATGGTGTAATCATGCTGAGAAGTGATCTTATATGTGATGTGGATCATAAGAATGTCACTTTTAGTCCAGCTTCAATTAGTAGCTTGAAATCTGTAATTGTTCTATCTGCAAGTGGCTGTTCCCATGATCTGTTATCAGTTGGAGAAGGCGACAAGTGCTCAGGGAGAACATGTAAATATTCAGGTGAAACTGTGACAGAATCTGTAGAATTTTCTGAGAGGCTAGGTCTGTCTGAGAAATTTTCATTCAGAGATGACCGAAGTGCCGCTATGCCATCGAAGGAATGCAGTATGGATCCAAATGAGTCATCTCTAGAAAAAATGATAGCGAAACGTGGTGTTCCTGAAAGTGTATTCAACAATGGGAACCCATCAGCTTTTGATTCATTGATTGGCTCTGATGGAAATGAGCATTCAAAAAGTAATGCACCAGTTACAAACAGGAATGTACCTCCTTTACAAAGTCAGGTTACAATAGCTAATGGCGGATCAGATGAATTGGTGGATGTAAGAGTATGTGATATCTGTGGTGATGTTGGCAGGGAGGCTTTGCTGGCTCTTTGTAGCAAGTGTGCTGATGGGGCAGAACATATTTACTGCATGCGCATAAAGATGGATAAGGTTCCTGAAGGTGACTGGATGTGCGAAGACTGCATGGTGATGCAAGAACCCGAGAGGCAGAAGCAAGCTGAAGTGAAAAGGCCAGACAATTTTTCAAACCTATCATGTTTGAAGGAAGCAAGTAAAGATTTGCAAACCACAAATCCTTGTGTTCGGCGTATTGGTGAAATTAGGATTAATCCCTGCTTATCTGGTAAGAGGCATGGATCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_119432.p1 GENE.R_Transcript_119432~~R_Transcript_119432.p1 ORF type:3prime_partial len:400 (+),score=87.16,PHD|PF00628.25|5.2e+03,PHD|PF00628.25|9.5e-07 R_Transcript_119432:184-1380(+)
MFGNLATVPSPSIEHFEIFKSAMEKEAVGSSETCMGEETVHQASVDSHRGLASSETSNIHSASACQSSLSEDVLSCNSLKGHSISDDQQKSQNVNTCQNAVGHPDEDVLNLQADGSSCVSKDNGVIMLRSDLICDVDHKNVTFSPASISSLKSVIVLSASGCSHDLLSVGEGDKCSGRTCKYSGETVTESVEFSERLGLSEKFSFRDDRSAAMPSKECSMDPNESSLEKMIAKRGVPESVFNNGNPSAFDSLIGSDGNEHSKSNAPVTNRNVPPLQSQVTIANGGSDELVDVRVCDICGDVGREALLALCSKCADGAEHIYCMRIKMDKVPEGDWMCEDCMVMQEPERQKQAEVKRPDNFSNLSCLKEASKDLQTTNPCVRRIGEIRINPCLSGKRHGS

Click here to download the sequence:
Link to NCBI Protein BLAST