Transcript Information: R_Transcript_119433.p1


Annotated TAIR IDAT5G16680.1
Annotated Gene NameRING/FYVE/PHD zinc finger superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5467534-5472956 | Reverse length=1311
E-Value3E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.85818622933578
Replicate 20.11390398055858
Replicate 30.16569068785644
Condition 2: 8 Hour
Replicate 10.53133884153154
Replicate 20.97045418478925
Replicate 31.6411944503062
Condition 3: 24 Hour
Replicate 11.3699957296822
Replicate 20.47859512963278
Replicate 30.71243885056809


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_119433.p1 GENE.R_Transcript_119433~~R_Transcript_119433.p1 ORF type:3prime_partial len:553 (+),score=113.28,PHD|PF00628.25|7.4e+03,PHD|PF00628.25|1.5e-06 R_Transcript_119433:337-1992(+)
ATGGAGAAAGAGGCTGTTGGCTCGTCTGAAACCTGCATGGGGGAGGAAACTGTTCATCAAGCTTCAGTTGACAGTCACCGGGGACTAGCAAGTAGTGAAACAAGTAATATTCATAGCGCGTCTGCCTGTCAGAGCTCATTGTCTGAAGATGTTCTGAGTTGCAATTCACTAAAGGGCCATAGCATCTCTGACGATCAACAAAAGTCTCAAAATGTTAATACTTGCCAGAATGCAGTAGGACACCCGGATGAAGATGTATTAAACCTCCAAGCTGATGGCAGCTCTTGTGTTAGCAAGGATAATGGTGTAATCATGCTGAGAAGTGATCTTATATGTGATGTGGATCATAAGAATGTCACATTTATTCCAGCTTCAATTAGTAGCTTGTGTCCAGCAGGGTTTGAGAAATCTGTAAATGTTCTGTCTGCAAGTGGCTGTTCCCATGATCTGTCATCAGTTGGAGAAGGCTACAAGTGCTCAGTGAGAACATGTAAATATTCAGGTGAAACTGTGACAGAATCTGTAGAATTTTCTGAGAGGCTAGGTCTGTCTGAGAAATTTTCATTCAGAGATGACCGAAGTGCCGCTATGCCATCGAAGGAATGCAGTATGGATCCAAATGAGTCATCTCTAGAAAAAATGATAGCGAAACGTGGTGTTCCTGAAAGTGTATTCAACAATGGGAACCCATCAGCTTTTGATTCATTGATTGGCTCTGATGGAAATGAGCATTCAAAAAGTAATGCACCAGTTACAAACAGGAATGTACCTCCTTTACAAAGTCAGGTTACAATAGCTAATGGCGGATCAGATGAATTGGTGGATGTAAGAGTATGTGATATCTGTGGTGATGTTGGCAGGGAGGCTTTGCTGGCTCTTTGTAGCAAGTGTGCTGATGGGGCAGAACATATTTACTGCATGCGCATAAAGATGGATAAGGTTCCTGAAGGTGACTGGATGTGCGAAGACTGCATGGTGATGCAAGAACCCGAGAGGCAGAAGCAAGCTGAAGTGAAAAGGCCAGACAATTTTTCAAACCTATCATGTTTGAAGGAAGCAAGTAAAGATTTGCAAACCACAAATCCTTGTGTTCGGCGTATTGGTGAAATTAGGATTAATCCCTGCTTATCTGGTAAGAGGCATGGATCTGTTATAGATGCGAGTCCTGCAGTAAAGAGAAGAAGAATTGAGAGTAATGTTCAACCAGTGAAGTCACCAGGATCTGGAGGAAAAATGGTGTTGAGTCGGGTTCCGTCGCTGAAGGTCACAAATGAGGGCAAACAAACTTCTCTTCAAATATCTTCTTTTGGCAACCGGTCTGCTAAAAAGGTTGCAGCACAGGCAAATTCACCATCACGTCTTAGATTACTTAAATCTAGGTCTGATATAGCAGTGAGACCCTCATTAAATCAGTCTCCAAAAAAGGCTGCAGAGCAGGCAGAATCACTATCACGTCCTAAATTACTAAAATCTAGGTCTGATTTAGCAGTGAGACCCTCATTAAGTAAGTCCTCTAAAAAGGTTGAGGAACAGGCAAAATCACCATCACGTCCTAGATTACTAAAATCAAGGTCTGATATAGCAGTGAGACCCTCACCAAAGGGGGGTATTCTTGAGAGAAGTCTTCAACCACTGAAGTCTTTCCATGCTGGGGGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_119433.p1 GENE.R_Transcript_119433~~R_Transcript_119433.p1 ORF type:3prime_partial len:553 (+),score=113.28,PHD|PF00628.25|7.4e+03,PHD|PF00628.25|1.5e-06 R_Transcript_119433:337-1992(+)
MEKEAVGSSETCMGEETVHQASVDSHRGLASSETSNIHSASACQSSLSEDVLSCNSLKGHSISDDQQKSQNVNTCQNAVGHPDEDVLNLQADGSSCVSKDNGVIMLRSDLICDVDHKNVTFIPASISSLCPAGFEKSVNVLSASGCSHDLSSVGEGYKCSVRTCKYSGETVTESVEFSERLGLSEKFSFRDDRSAAMPSKECSMDPNESSLEKMIAKRGVPESVFNNGNPSAFDSLIGSDGNEHSKSNAPVTNRNVPPLQSQVTIANGGSDELVDVRVCDICGDVGREALLALCSKCADGAEHIYCMRIKMDKVPEGDWMCEDCMVMQEPERQKQAEVKRPDNFSNLSCLKEASKDLQTTNPCVRRIGEIRINPCLSGKRHGSVIDASPAVKRRRIESNVQPVKSPGSGGKMVLSRVPSLKVTNEGKQTSLQISSFGNRSAKKVAAQANSPSRLRLLKSRSDIAVRPSLNQSPKKAAEQAESLSRPKLLKSRSDLAVRPSLSKSSKKVEEQAKSPSRPRLLKSRSDIAVRPSPKGGILERSLQPLKSFHAGG

Click here to download the sequence:
Link to NCBI Protein BLAST