Transcript Information: R_Transcript_119435.p1


Annotated TAIR IDAT5G16680.1
Annotated Gene NameRING/FYVE/PHD zinc finger superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5467534-5472956 | Reverse length=1311
E-Value1E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.073285516287253
Replicate 30.23986112666128
Condition 2: 8 Hour
Replicate 10.34186198879225
Replicate 20.078048453197855
Replicate 30.72859868109756
Condition 3: 24 Hour
Replicate 10.28046186840127
Replicate 20
Replicate 30.45838124998738


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_119435.p1 GENE.R_Transcript_119435~~R_Transcript_119435.p1 ORF type:3prime_partial len:573 (+),score=122.48,PHD|PF00628.25|7.7e+03,PHD|PF00628.25|1.6e-06 R_Transcript_119435:254-1717(+)
ATGGAGAAAGAGGCTGTTGGCTCGTCTGAAACCTGCATGGGGGAGGAAACTGTTCATCAAGCTTCAGTTGACAGTCACCGGGGACTAGCAAGTAGTGAAACAAGTAATATTCATAGCGCGTCTGCCTGTCAGAGCTCATTGTCTGAAGATGTTCTGAGTTGCAATTCACTAAAGGGCCATAGCATCTCTGACGATCAACAAAAGTCTCAAAATGTTAATACTTGCCAGAATGCAGTAGGACACCCGGATGAAGATGTATTAAACCTCCAAGCTGATGGCAGCTCTTGTGTTAGCAAGGATAATGGTGTAATCATGCTGAGAAGTGATCTTATATGTGATGTGGATCATAAGAATGTCACATTTATTCCAGCTTCAATTAGTAGCTTGTGTCCAGCAGGGTTTGAGAAATCTGTAAATGTTCTGTCTGCAAGTGGCTGTTCCCATGATCTGTCATCAGTTGGAGAAGGCTACAAGTGCTCAGTGAGAACATGTAAATATTCAGGTGAAACTGTGACAGAATCTGTAGAATTTTCTGAGAGGCTAGGTCTGTCTGAGAAATTTTCATTCAGAGATGACCGAAGTGCCGCTATGCCATCGAAGGAATGCAGTATGGATCCAAATGAGTCATCTCTAGAAAAAATGATAGCGAAACGTGGTGTTCCTGAAAGTGTATTCAACAATGGGAACCCATCAGCTTTTGATTCATTGATTGGCTCTGATGGAAATGAGCATTCAAAAAGTAATGCACCAGTTACAAACAGGAATGTACCTCCTTTACAAAGTCAGGTTACAATAGCTAATGGCGGATCAGATGAATTGGTGGATGTAAGAGTATGTGATATCTGTGGTGATGTTGGCAGGGAGGCTTTGCTGGCTCTTTGTAGCAAGTGTGCTGATGGGGCAGAACATATTTACTGCATGCGCATAAAGATGGATAAGGTTCCTGAAGGTGACTGGATGTGCGAAGACTGCATGGTGATGCAAGAACCCGAGAGGCAGAAGCAAGCTGAAGTGAAAAGGCCAGACAATTTTTCAAACCTATCATGTTTGAAGGAAGCAAGTAAAGATTTGCAAACCACAAATCCTTGTGTTCGGCGTATTGGTGAAATTAGGATTAATCCCTGCTTATCTGGTAAGAGGCATGGATCTGATATAGATGTGAGTCCTGCACTAAAGAGAGGAAGACTTGAGAGTAATGTTCAACCAGTGAAGTCACCAGGATCTGGAGGAAAAATGGTGTTGAGTCGGGTTACATCACTGAAGATCACGAATGAGGGCAAACGAACTTCTCTTCAAATACCTTCTTTTGGCAACCGGTCTGCTAAAAAGGTTGCAGCCCTGGCAAATTCACCATCACATCTTAGATTACTCAAATCTAGGTCTGATATAGCAGTGAGACCCTCACCAAAGGGGGGTATTCTTGAGAGAAGTCTTCAACCACTGAAGTCTTTCCATGCTGGGGGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_119435.p1 GENE.R_Transcript_119435~~R_Transcript_119435.p1 ORF type:3prime_partial len:573 (+),score=122.48,PHD|PF00628.25|7.7e+03,PHD|PF00628.25|1.6e-06 R_Transcript_119435:254-1717(+)
MEKEAVGSSETCMGEETVHQASVDSHRGLASSETSNIHSASACQSSLSEDVLSCNSLKGHSISDDQQKSQNVNTCQNAVGHPDEDVLNLQADGSSCVSKDNGVIMLRSDLICDVDHKNVTFIPASISSLCPAGFEKSVNVLSASGCSHDLSSVGEGYKCSVRTCKYSGETVTESVEFSERLGLSEKFSFRDDRSAAMPSKECSMDPNESSLEKMIAKRGVPESVFNNGNPSAFDSLIGSDGNEHSKSNAPVTNRNVPPLQSQVTIANGGSDELVDVRVCDICGDVGREALLALCSKCADGAEHIYCMRIKMDKVPEGDWMCEDCMVMQEPERQKQAEVKRPDNFSNLSCLKEASKDLQTTNPCVRRIGEIRINPCLSGKRHGSDIDVSPALKRGRLESNVQPVKSPGSGGKMVLSRVTSLKITNEGKRTSLQIPSFGNRSAKKVAALANSPSHLRLLKSRSDIAVRPSPKGGILERSLQPLKSFHAGG

Click here to download the sequence:
Link to NCBI Protein BLAST