Transcript Information: R_Transcript_119507.p1


Annotated TAIR IDAT1G65570.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:24374098-24375846 | Reverse length=397
E-Value8E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.0576133944254
Replicate 24.9180523497635
Replicate 35.9846431557515
Condition 2: 8 Hour
Replicate 15.956021203384
Replicate 24.8347852629591
Replicate 36.0505368734623
Condition 3: 24 Hour
Replicate 15.7911585799614
Replicate 25.7621847551959
Replicate 37.0987150335883


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_119507.p1 GENE.R_Transcript_119507~~R_Transcript_119507.p1 ORF type:5prime_partial len:111 (+),score=7.19,Glyco_hydro_28|PF00295.13|4.5e-06 R_Transcript_119507:1-333(+)
GGTAATGGAACCATTGATGTACATCACAAGCCTCGCATTTCATTGGATACAAAAACAGAGAACCACATCTTCAATTTGATGCCTTTCGTAAACGTGTCCAACGGAGTGATAGACGGGATCACATCAGTAAAAACTTACATTCAAGTGTTGGTTTCCGAGAGCCGCAACGTCACAATTCAGAATGTCAAGCTTGATGGACTTTACGTGACTGCATCCAGTGTTGTGACCATGACCAGCAGCTTTATTAAGGCCGGCAATGAATGTGTCAATGTTGCTCCTGGTTCCACCGATGTATCTGTAAATGGGGTTACCTGCTCCAAGCAACGACTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_119507.p1 GENE.R_Transcript_119507~~R_Transcript_119507.p1 ORF type:5prime_partial len:111 (+),score=7.19,Glyco_hydro_28|PF00295.13|4.5e-06 R_Transcript_119507:1-333(+)
GNGTIDVHHKPRISLDTKTENHIFNLMPFVNVSNGVIDGITSVKTYIQVLVSESRNVTIQNVKLDGLYVTASSVVTMTSSFIKAGNECVNVAPGSTDVSVNGVTCSKQRL*

Click here to download the sequence:
Link to NCBI Protein BLAST