Transcript Information: R_Transcript_119510.p1


Annotated TAIR IDAT3G15130.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:5097153-5099222 | Reverse length=689
E-Value9E-94
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8892395892623
Replicate 21.2036095780044
Replicate 32.0791147181221
Condition 2: 8 Hour
Replicate 11.2476873858469
Replicate 21.6378989883671
Replicate 32.4857301168046
Condition 3: 24 Hour
Replicate 13.3632456448229
Replicate 23.3363847047848
Replicate 33.2761850964464


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_119510.p1 GENE.R_Transcript_119510~~R_Transcript_119510.p1 ORF type:5prime_partial len:628 (+),score=83.43,PPR_2|PF13041.2|4.6,PPR_2|PF13041.2|3.1e-11,PPR_2|PF13041.2|2.9e+02,PPR_2|PF13041.2|2.6e-06,PPR_2|PF13041.2|77,PPR_2|PF13041.2|6.1e-09,PPR_2|PF13041.2|0.093,PPR_2|PF13041.2|1.7e-07,PPR_2|PF13041.2|93,PPR_2|PF13041.2|4.8e+02,PPR|PF01535.16|4.1,PPR|PF01535.16|4.2e-06,PPR|PF01535.16|4,PPR|PF01535.16|0.00025,PPR|PF01535.16|1.1e+03,PPR|PF01535.16|2.6e-07,PPR|PF01535.16|0.0015,PPR|PF01535.16|3.5e-05,PPR|PF01535.16|0.026,PPR|PF01535.16|11,PPR|PF01535.16|1.4e+04,PPR_1|PF12854.3|1e+03,PPR_1|PF12854.3|0.0016,PPR_1|PF12854.3|9.6,PPR_1|PF12854.3|1.6e+02,PPR_1|PF12854.3|0.21,PPR_1|PF12854.3|8.9e-06,PPR_1|PF12854.3|2.2,PPR_1|PF12854.3|0.032,PPR_1|PF12854.3|37,PPR_1|PF12854.3|4.3,PPR_3|PF13812.2|6.9e+02,PPR_3|PF13812.2|0.00055,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|7.9e+03,PPR_3|PF13812.2|7e+03,PPR_3|PF13812.2|2.7,PPR_3|PF13812.2|0.53,PPR_3|PF13812.2|0.04,PPR_3|PF13812.2|69,PPR_3|PF13812.2|2.7e+02,PPR_3|PF13812.2|1.6e+04 R_Transcript_119510:3-1886(+)
GAGAGTACCTACTACGCCCAAATTCCCGACCCCTCTATCACGATACTTGGGCTGTATCATATCATGGCTTCGAAAATGCGAAAGTTACTAATATTACACAAACAGCTATATAGATGTTCAATCAGGGAGCGTTTAGATCACATTTTCTCTCTCTATTCAGATATCAACACCAGGTTTAGCTCATTCTACCATTCTGAGAGAAACCCATTCCCACCATTTATTCAATCTCACATTCATGGAAATGGTTCTATTTATTACCATTTTAACCATATCCTACAAGAATGCGCCTTTTCTTCGGATTTACGAACTGGGAAATCAGTCCATTGCCTTCTTCTTAAACAAAACTTTGGTGGGTTTGTTCCGATTTGGAACCAGATTCTCAAGATATATCTCAACCATGGTGGGTTCGATATTGGCTGCCAGGTGTTTGATCAAATGCCTCAGAGAGATGTAGTCACTTATAACACTCTGATTTCTGCTAATGTTCGTTTTGGTAACTGTCATAAAGCTATTTATCTTTATTCAATGATGAAAGAAGAGGATGTTTTTCCCAATCATATAACATTCGCCAGCTTGATTCGTTCGGCGTGGTTTGGGAGTACATTGCATTCCCAAGTTATTCGTTATGGGTTGGGTAGCAATCGCTTCGTTGGGAGCTCAATGGTTGAAGTTTATGCAAAAGAAAGAAGATTGGGTGATGCTATTAGAGCTTTCAGCGAGATATCAGAATTGGATTTGGTGTCATGGAATATTATGATAGATGGTTGTGCTACAAACAATAGCAAAGAGCATGCCTTGAGATTTTTCACAAACATGATAAGTGAAAATGTTGGCTATGATGGGTTCACCTTGACTAGTGTGCTTAAAACATTTTCTGAACCTAGAGATTTGTTTTGGGGAATGTTGCTGCATGGTGTTGCTACTAAAGCTGGTCTGGTATTCGAAATACCTATGAATAATGCCTTGATAACCATGTACTCGAAATGCGAGGAAGGAATGTTATCGGCAAAAAAGATCTTTTCTGAGATTGTGGTACCTAATATTGTCTCCTGGACAGCAATGATCGCTGGTTTGATGCAAAATGGGAAAAATGAAGAGGCAATTGGGTTCTACAGAAAAATGCTTGAATCAGGTGTTAACGAGAACCATTTTAGCTTTGCTAGCATCCTTCCTGCATATGGTAACTTGGCTAATCTTGAGCATGGAAGGCTAATGCATGGGAGGATTCTGAAGTCCCCATTCAGCACAGATGTATCTGTGAATAACGCGTTGATAGACATGTATTCAAAATGTGGCAGCTTACAAGATGCCCACTCATTGTTCTTGTCGATGAGACTCCATGATGTGGTTTCATACTCCACATTGATTACATGTTTCGGACAGCATGGTAAGGGAAGAGAAGCTCTTGGTGCTCTACAGGATATGATGAAAGCAAATTTAATTCCAGATGATGTTACATTCCTTGGCTGCCTCTCTGCTTGTAGCCATTCTGGTCTAGTGGATGAAGGCATCGAGATCTTTAGACTGATGGTTGATGTTTACAATCAAAAGCCAAGAAGAGAGCATATCTCTTGTGTTGTAGATTTGTTGGGTCGTGCAGGCAGGCTAAATGAGGCCGAGGCTTTTATTGAAGAGACGGGCATTGAGTCTGATGTCTCAGCATGGGAAACACTGCTAGGTGCCTGTAGGATTCATGGAGAAATGACCGTGGGAGAAAAAGCTGCTAAAAGAATCATAGAAATGCAACCAGAGAAACACGAACCGTATGTGTTGCTAGCCAATCTTTATGCTGCAAGTGAATTATGGGAAGACAAAGAGGTGCTGAGGGAAAGATCTGGCGGTGAGGTGCTAAAAGCAGAGGTAGGCCGCAGCTGGGTAGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_119510.p1 GENE.R_Transcript_119510~~R_Transcript_119510.p1 ORF type:5prime_partial len:628 (+),score=83.43,PPR_2|PF13041.2|4.6,PPR_2|PF13041.2|3.1e-11,PPR_2|PF13041.2|2.9e+02,PPR_2|PF13041.2|2.6e-06,PPR_2|PF13041.2|77,PPR_2|PF13041.2|6.1e-09,PPR_2|PF13041.2|0.093,PPR_2|PF13041.2|1.7e-07,PPR_2|PF13041.2|93,PPR_2|PF13041.2|4.8e+02,PPR|PF01535.16|4.1,PPR|PF01535.16|4.2e-06,PPR|PF01535.16|4,PPR|PF01535.16|0.00025,PPR|PF01535.16|1.1e+03,PPR|PF01535.16|2.6e-07,PPR|PF01535.16|0.0015,PPR|PF01535.16|3.5e-05,PPR|PF01535.16|0.026,PPR|PF01535.16|11,PPR|PF01535.16|1.4e+04,PPR_1|PF12854.3|1e+03,PPR_1|PF12854.3|0.0016,PPR_1|PF12854.3|9.6,PPR_1|PF12854.3|1.6e+02,PPR_1|PF12854.3|0.21,PPR_1|PF12854.3|8.9e-06,PPR_1|PF12854.3|2.2,PPR_1|PF12854.3|0.032,PPR_1|PF12854.3|37,PPR_1|PF12854.3|4.3,PPR_3|PF13812.2|6.9e+02,PPR_3|PF13812.2|0.00055,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|7.9e+03,PPR_3|PF13812.2|7e+03,PPR_3|PF13812.2|2.7,PPR_3|PF13812.2|0.53,PPR_3|PF13812.2|0.04,PPR_3|PF13812.2|69,PPR_3|PF13812.2|2.7e+02,PPR_3|PF13812.2|1.6e+04 R_Transcript_119510:3-1886(+)
ESTYYAQIPDPSITILGLYHIMASKMRKLLILHKQLYRCSIRERLDHIFSLYSDINTRFSSFYHSERNPFPPFIQSHIHGNGSIYYHFNHILQECAFSSDLRTGKSVHCLLLKQNFGGFVPIWNQILKIYLNHGGFDIGCQVFDQMPQRDVVTYNTLISANVRFGNCHKAIYLYSMMKEEDVFPNHITFASLIRSAWFGSTLHSQVIRYGLGSNRFVGSSMVEVYAKERRLGDAIRAFSEISELDLVSWNIMIDGCATNNSKEHALRFFTNMISENVGYDGFTLTSVLKTFSEPRDLFWGMLLHGVATKAGLVFEIPMNNALITMYSKCEEGMLSAKKIFSEIVVPNIVSWTAMIAGLMQNGKNEEAIGFYRKMLESGVNENHFSFASILPAYGNLANLEHGRLMHGRILKSPFSTDVSVNNALIDMYSKCGSLQDAHSLFLSMRLHDVVSYSTLITCFGQHGKGREALGALQDMMKANLIPDDVTFLGCLSACSHSGLVDEGIEIFRLMVDVYNQKPRREHISCVVDLLGRAGRLNEAEAFIEETGIESDVSAWETLLGACRIHGEMTVGEKAAKRIIEMQPEKHEPYVLLANLYAASELWEDKEVLRERSGGEVLKAEVGRSWVA*

Click here to download the sequence:
Link to NCBI Protein BLAST