Transcript Information: R_Transcript_119628.p1


Annotated TAIR IDAT5G28300.1
Annotated Gene NameDuplicated homeodomain-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:10292789-10295101 | Reverse length=619
E-Value3.4E-72
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0400547552546
Replicate 21.8244648509889
Replicate 31.2725965331196
Condition 2: 8 Hour
Replicate 12.7555318103025
Replicate 21.1467118892916
Replicate 31.2669927641011
Condition 3: 24 Hour
Replicate 11.4062474512696
Replicate 22.51341981659
Replicate 31.4342370592554


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_119628.p1 GENE.R_Transcript_119628~~R_Transcript_119628.p1 ORF type:complete len:702 (+),score=172.46,Myb_DNA-bind_4|PF13837.2|9.5e-10,Myb_DNA-bind_4|PF13837.2|6e+03,Myb_DNA-bind_4|PF13837.2|5.7e+03,Myb_DNA-bind_4|PF13837.2|1.5e-19,Myb_DNA-bind_6|PF13921.2|0.0089,Myb_DNA-bind_6|PF13921.2|0.013 R_Transcript_119628:268-2373(+)
ATGTTTGATGGAATGCCTGACCAGTTCTACCAATTTTTAGCAGCAGCTTCAAGAGCCAATACTACTACTAGTACTAGTACCACCACTACTTCACTTCCACTCCCACTTTCTTTCTCTCTTCACCATCATCACCATCACCACCATCCCAGTTCTAATTTCCCAACAAGTTGCTTTGATGTTGATGTTCATCAACAAGCTAGCTTACTTTCACCACCACCTCATCTTCTCCTTCATCATAACCCACAATTGCCATTGCACCATAATCATAAGCATCATAAACAAGAGACATCGGTTGATGATGTTAATGTTGTTCGACCCGAGCTCGAACCGATTGATCATGACCACCATCCTTGGTCTAATGATGAAGTTCTTGCCCTTCTCAGGATCAGATCTAGTATGGACAACAACACTTGGTTCCCTGACTTCACTACTTGGGATAACGTCTCCAGAAAGCTAGCAGAAGTTGGGTTCAAAAGGAGTGCTGAGAAGTGCAAAGAGAAATTTGAGGAGGAAACCAGAAGCTTCAACAGCAGCTTTATTAGTAATACTACTAACAACAACAAGAATAATAATAATAATAATAATAATGTTAGCAATATTACTAACAACATCAGGCTCTTTGGTGAGCTTGAAGAGGTTTATACTGATCATCATCAACAAAGCCCTCCTCATTCTCCTCCTCCTCCTGAACCTGAACCCGAACCCGAACCTGATCCTGTATTAGAAGAAGAAGAAGAACAAGAGTTACAGGAAGACAAGAGAGAAGAGGAGGAGAGATTAGAAGACAAGAGAAATGACAAGGAGGAGATGATGAGGTCAGAAGACAGTGAGAAGACGGAGGAAAATACAAAGAAGGTACAGAGGAAAAGAAAAAGAAGCAGCCAAAACAAGTTTGAAATGTTCAAAGGGTTTTGTGAGATTATTGTCAACAAAATGATGGCACAACAAGAGAAGCTTCACTCCAAGATTCTTGAAGATATGGTTAAAAGAGATGAAGAGAAGATTGCTAAGGAAGAGGCTTGGAAGAAGCAAGAGATTGAGAGGCTTCATAAGGAGATGGAGGTTAGGGCTCATGAACAAGCCATTGCGGGTGATCGCCAAGCTAAGATCCTTGAGTTCTTGAACAAGTTCATGAATTCAAACTATTTGGAGGTTCAATCTCTTGGAGAGGCCATTGAGAATCTCATTAAGGTACCTAATAGTTTATCTAATTCCTCAATTTTAACAACTTGTACTCCTACAACACAACATGATCTTCAAAACCCTAGTTGTAGTTCCTTAGTGGTGACCCAAAAGTGTTCATCATCATCACCACATAATGAGAATCTTGCTACCCAAAGTCCTAGTAGATTAGACAACTCAAAGTCAACTCTACCCGTATCTTCGCCCTCCACAGACCAACCCAGGTCCCAGAACCCTACTAACCCTCTCAGCAGCAATAGTGCTGCTGGGAATGATGATACATTGTTTAAACTTCTTTCGGTATCTGGGTCTGATATTCATACCAGCACTGATGCAGCGGATCCCATCAACATGGAGTTCAAATCGCCAGACAGTAGTACCCAATCCGCCTACCATAGGGCGAGTGTAGAAAATAGTCTTAGTATCAGTGGAAGTGGAAGAGTTGCTGCTGCTGGTGGTGGTGGTGGTAAAGATGACATTGGAAGGAGATGGCCTAGAGATGAAGTACTTGCATTGATCAACATAAGATGCAACTTGTTCAACAAGAATGGGGATCCTCAACATGATAAATTAGAAGGCTCAACAAAGGGTCCATTATGGGAGAGGATCTCACAAAAGATGATGGAGCTAGGATACAAGAGAAGTGCAAAGAGGTGTAAGGAAAAATGGGAGAACATAAACAAGTACTTTAGGAAAACCAAGGACTTGAACAAGAAGAGATCCATTGACTCAAGAACATGTCCATACTTTCATCAACTTAGCAACTTATACAGCCAAACCACGTCGTCCGGCGTACAAGGAGGAGGATCAACTCCTTCAAACGATGGAACTACTACTACTACTACAACAATAATGCATAATATTGCTTCTGATCAAGGTAATGAAGGTGTGGTCCAAGCACCATCCTTTGATTTTGATTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_119628.p1 GENE.R_Transcript_119628~~R_Transcript_119628.p1 ORF type:complete len:702 (+),score=172.46,Myb_DNA-bind_4|PF13837.2|9.5e-10,Myb_DNA-bind_4|PF13837.2|6e+03,Myb_DNA-bind_4|PF13837.2|5.7e+03,Myb_DNA-bind_4|PF13837.2|1.5e-19,Myb_DNA-bind_6|PF13921.2|0.0089,Myb_DNA-bind_6|PF13921.2|0.013 R_Transcript_119628:268-2373(+)
MFDGMPDQFYQFLAAASRANTTTSTSTTTTSLPLPLSFSLHHHHHHHHPSSNFPTSCFDVDVHQQASLLSPPPHLLLHHNPQLPLHHNHKHHKQETSVDDVNVVRPELEPIDHDHHPWSNDEVLALLRIRSSMDNNTWFPDFTTWDNVSRKLAEVGFKRSAEKCKEKFEEETRSFNSSFISNTTNNNKNNNNNNNNVSNITNNIRLFGELEEVYTDHHQQSPPHSPPPPEPEPEPEPDPVLEEEEEQELQEDKREEEERLEDKRNDKEEMMRSEDSEKTEENTKKVQRKRKRSSQNKFEMFKGFCEIIVNKMMAQQEKLHSKILEDMVKRDEEKIAKEEAWKKQEIERLHKEMEVRAHEQAIAGDRQAKILEFLNKFMNSNYLEVQSLGEAIENLIKVPNSLSNSSILTTCTPTTQHDLQNPSCSSLVVTQKCSSSSPHNENLATQSPSRLDNSKSTLPVSSPSTDQPRSQNPTNPLSSNSAAGNDDTLFKLLSVSGSDIHTSTDAADPINMEFKSPDSSTQSAYHRASVENSLSISGSGRVAAAGGGGGKDDIGRRWPRDEVLALINIRCNLFNKNGDPQHDKLEGSTKGPLWERISQKMMELGYKRSAKRCKEKWENINKYFRKTKDLNKKRSIDSRTCPYFHQLSNLYSQTTSSGVQGGGSTPSNDGTTTTTTTIMHNIASDQGNEGVVQAPSFDFDF*

Click here to download the sequence:
Link to NCBI Protein BLAST