Transcript Information: R_Transcript_1197.p1


Annotated TAIR IDAT5G16110.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast hits to 133 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5261171-5262668 | Reverse length=244
E-Value5E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1172.93376721671
Replicate 2158.97198886626
Replicate 3179.98150968405
Condition 2: 8 Hour
Replicate 1103.40030969151
Replicate 2137.7430321417
Replicate 3139.71554003235
Condition 3: 24 Hour
Replicate 1139.18990553482
Replicate 2112.67086541815
Replicate 3136.0789868534


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_1197.p1 GENE.R_Transcript_1197~~R_Transcript_1197.p1 ORF type:complete len:175 (+),score=42.37 R_Transcript_1197:165-689(+)
ATGAAAAGGTGGGATATTCATCAGAAGAACGCCTTGGTGGTGGGTTGTGAAGAGATGGTTTCTCTCTCATCGGGTCCGGTTGTTTGTCCTAAGCCTCGTAAAGTTGGGTTTCTTGCTGGAAATCTCACCATGCATCTCAGATGGCAAAGAAGTAACCAACAACAGGCTGATATTTGTGACTCCAAAGCTGGGGCTGAGCTTCTTGATATGATTCTTAGAAAGGAATCCTCAAGAGAGATTGATCCACCTCCATTTTTTTGCGGATCTCCACCTACTAGAGTTTCTAACCCATTAGTCCATGATGCTCATTTTGGGGATGAGAATTTATCTCCTTTGTCAACTTTACAACTTGCATCCCCGTCAACTGGTTCATCGTCACCACCACCATCATGTCAATCGCCATCTGCCATGAAATCGGGGTGTGCTTGGATGAGGTTTGGGCTCAAGCCAGCCGCCGTTAGAGTAGAAGGTTTTGATTGCCTCAGCAGGGATCGCCAGAATTCCGGTATCACTGCTGTGGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_1197.p1 GENE.R_Transcript_1197~~R_Transcript_1197.p1 ORF type:complete len:175 (+),score=42.37 R_Transcript_1197:165-689(+)
MKRWDIHQKNALVVGCEEMVSLSSGPVVCPKPRKVGFLAGNLTMHLRWQRSNQQQADICDSKAGAELLDMILRKESSREIDPPPFFCGSPPTRVSNPLVHDAHFGDENLSPLSTLQLASPSTGSSSPPPSCQSPSAMKSGCAWMRFGLKPAAVRVEGFDCLSRDRQNSGITAVA*

Click here to download the sequence:
Link to NCBI Protein BLAST