Transcript Information: R_Transcript_119811.p1


Annotated TAIR IDAT2G30780.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:13116547-13118059 | Forward length=452
E-Value9E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8843122263353
Replicate 21.2875089877919
Replicate 31.9989370072114
Condition 2: 8 Hour
Replicate 12.5987356665708
Replicate 22.9005860878896
Replicate 34.6663338623165
Condition 3: 24 Hour
Replicate 12.8155801316996
Replicate 23.0690100814718
Replicate 34.8008408865129


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_119811.p1 GENE.R_Transcript_119811~~R_Transcript_119811.p1 ORF type:complete len:424 (+),score=63.50,PPR_2|PF13041.2|0.028,PPR_2|PF13041.2|0.0072,PPR_2|PF13041.2|5e-06,PPR_2|PF13041.2|3.4e+03,PPR_2|PF13041.2|6e+03,PPR_2|PF13041.2|8.5,PPR|PF01535.16|13,PPR|PF01535.16|35,PPR|PF01535.16|1,PPR|PF01535.16|5.1e-05,PPR|PF01535.16|1.2e+02,PPR|PF01535.16|5.7e+02,PPR|PF01535.16|7.6e+02,PPR|PF01535.16|1.4e+03,PPR|PF01535.16|12,PPR_3|PF13812.2|9.6e+03,PPR_3|PF13812.2|3.7,PPR_3|PF13812.2|88,PPR_3|PF13812.2|5.6,PPR_3|PF13812.2|0.3,PPR_3|PF13812.2|9.3e+03,PPR_3|PF13812.2|2.7e+03,PPR_3|PF13812.2|3.3e+02,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|15 R_Transcript_119811:62-1333(+)
ATGAGGTTTGTGCGTAGGGTTTTAGCTGCAACTGAAAAGGTTTTATGCTCAAGCCCTCAACTTCCTCACAAGCTTGCTAGTAATTCACAACAACCCTTTTGCAGTTACCTCTCAATCTCCAACAATTTGATACAGAGATTGCTCAAAGAACCCAATTCACGCATCAAAGCAATTCTTGATTCTGAACAGAATTCAACTCTTCAAAGTTTCGAATTTTCTTGGCATTCCTTTGTTTCTGCTCTCAATTCTTCTTCTACAGCTAAGGCTGTGCAGGCTTTAGAATGGAGATTAGAGAAAATGCTGAACGAAAACGAGAGAGATCAGGAGCAATATTCTGATCTAATATCTCTCTGTGGAGAAACTTGCAGTCTTTCACTAGCAATGCGTGTGTTTATGGCAATGGAGTCTATTGGAGTGAAACCTACTTCTGATGTCTTTAATTCGCTGATTTTGGTTTCTTTCTCTTTGAGAAATGAAGTGACGGCTATCAGCTTGTTTGAGATTATGGAGAGGTCTCAAGACTATAAACCAAACGCTAAAACTTATAATGCTTTCATCTCTATGTATTCTAAATTGGGAAATGCTAAGGCCATGCAAGCATGGGCCTCGGCTAAAAGAGCTGCTGGATTTGCTGCTGATTTGCAGTTCTATGAATCTCTAATTTCAGGCTATGTTCAAGTCAGACGTTTCGATAGTGCTGAGAAGTGCTACAAAGAAATGATATGGTCAGGATTTATACCCAGTATACACGTTTTAGATAAAATGGTTGATGGGCTTTGTGATCAGCGGAATTTTGTAGGAGCTAAAGAGTTTGTACTATATATGATCGACTACCAATGGAAAATCAGTACTCATATAGCTAAAAGAGTTGTAGGTTTGTGTTCAGCAATAGGGAAAATTGAAAGCATGGAGGAGCTTTTCCAAATCCTAACAGCATCTAATCAAAGTCCAGAAGTTTTGTCACAAATACATTGTGGGATTATATGTATGCATGCTAAGGCAGATAGACTAGATGATGTGGAATATTCCGTTGGAAGGATGTTGAAACATGAGATATCATTTCAATCCGCTGTAGATGTCAATGTAGTAATCTCTTCTTACTTCAGGCGGTCAGCATATGACAGGCTGGAGCTGTTTTTGAAGCATGTTAAGGGCTCTTGCCAGTTCACGAAATCAACCTATGATTTGTTGGTTACAGGTTATCGGAAAGCTGGATTATCTGAAAAATTGGATGCATTGCTTAAGGACGTTAGCTTAGGTGGAATGTCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_119811.p1 GENE.R_Transcript_119811~~R_Transcript_119811.p1 ORF type:complete len:424 (+),score=63.50,PPR_2|PF13041.2|0.028,PPR_2|PF13041.2|0.0072,PPR_2|PF13041.2|5e-06,PPR_2|PF13041.2|3.4e+03,PPR_2|PF13041.2|6e+03,PPR_2|PF13041.2|8.5,PPR|PF01535.16|13,PPR|PF01535.16|35,PPR|PF01535.16|1,PPR|PF01535.16|5.1e-05,PPR|PF01535.16|1.2e+02,PPR|PF01535.16|5.7e+02,PPR|PF01535.16|7.6e+02,PPR|PF01535.16|1.4e+03,PPR|PF01535.16|12,PPR_3|PF13812.2|9.6e+03,PPR_3|PF13812.2|3.7,PPR_3|PF13812.2|88,PPR_3|PF13812.2|5.6,PPR_3|PF13812.2|0.3,PPR_3|PF13812.2|9.3e+03,PPR_3|PF13812.2|2.7e+03,PPR_3|PF13812.2|3.3e+02,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|15 R_Transcript_119811:62-1333(+)
MRFVRRVLAATEKVLCSSPQLPHKLASNSQQPFCSYLSISNNLIQRLLKEPNSRIKAILDSEQNSTLQSFEFSWHSFVSALNSSSTAKAVQALEWRLEKMLNENERDQEQYSDLISLCGETCSLSLAMRVFMAMESIGVKPTSDVFNSLILVSFSLRNEVTAISLFEIMERSQDYKPNAKTYNAFISMYSKLGNAKAMQAWASAKRAAGFAADLQFYESLISGYVQVRRFDSAEKCYKEMIWSGFIPSIHVLDKMVDGLCDQRNFVGAKEFVLYMIDYQWKISTHIAKRVVGLCSAIGKIESMEELFQILTASNQSPEVLSQIHCGIICMHAKADRLDDVEYSVGRMLKHEISFQSAVDVNVVISSYFRRSAYDRLELFLKHVKGSCQFTKSTYDLLVTGYRKAGLSEKLDALLKDVSLGGMS*

Click here to download the sequence:
Link to NCBI Protein BLAST