Transcript Information: R_Transcript_119816.p1


Annotated TAIR IDAT4G32520.1
Annotated Gene Nameserine hydroxymethyltransferase 3
Annotated Gene Symbol(s)SHM3, AtSHMT3
Annotation TypeOrtholog
Chromosome Positionchr4:15689642-15692334 | Reverse length=529
E-Value6.6E-291
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.0767900210398
Replicate 25.4872364064372
Replicate 37.3584256887822
Condition 2: 8 Hour
Replicate 19.8210093527063
Replicate 210.876073200432
Replicate 310.607656297213
Condition 3: 24 Hour
Replicate 110.541425097294
Replicate 211.327837143436
Replicate 39.6528352793395


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_119816.p1 GENE.R_Transcript_119816~~R_Transcript_119816.p1 ORF type:complete len:551 (+),score=105.92,SHMT|PF00464.15|1.8e-190 R_Transcript_119816:133-1785(+)
ATGCAAGCTTGCAGTGGAGCAGCAACAACCTCCCTAATGAGTTCCATTCATCAACCTCTGTTGCCCGAAATAAACTCCCCTTCTTCTCTTTTTTCTCATAGTAAAGGGATTAACAAGTTCACTATTTTACCATTAAAAAATTATTCTTCCATAAATTTTTCAAGGTCTTCTTCTTCTTCCTCTATCTCCAACAGTTTGGTCACTGGTAGACCACCCTCCTCTATCTCTGTTCCTGCCCCTGATATTGCAGGTGATGGAAGCAGCTTCAAAGACTATGGGCTCAATGATGCTGATCCCGAAGTGCATAGCATCATTGGTAAAGAAAAGCAAAGACAGTTTAGAAGTCTTGAGCTTATTGCATCAGAGAACTTCACATCTAGAGCCGTGATGGAAGCTGTTGGTTCTTGTCTCACAAACAAATATTCTGAAGGATTACCTGGGAAAAGGTATTATGGTGGCAATGAATATATTGATGAACTTGAGATCCTTTGTCAACAGAGGGCTTTGGAAGCATTTCATTTGGATGGGGAGAAGTGGGGTGTAAATGTTCAACCATTGTCTGGCTCGCCTGCAAATTTTGAGGTTTACACTGCACTCCTGAACCCACATGACCGAATCATGGGTCTAGATTTACCTCATGGAGGACATTTGTCTCATGGGTTTATGACTCCTAAAAGACGAGTTTCAGGAACATCGATTTACTTTGAATCTATGCCTTACCGCCTTGATGAGTCCACAGGTTTGGTCAATTATGACATGCTTGAGAAAACTGCCACTCTATTTCGGCCAAAACTCATCATTGCTGGAGCTAGTGCATATCCTAGGGATTTTGACTATCCTCGTATGAGGAAGATTGCAGATGTAATTGGCGCATTTCTTATGATGGACATGGCACATATAAGTGGGCTCGTTGCTGCTTCTGTAGTTGGCAACCCATTTGAGTACTGTGATATAGTGACCACGACAACTCACAAGTCTCTACGAGGTCCTAGAGGTGGAATGATCTTCTACAAGAAGGATACCATATTAGGAGTTGATTTAGAATCTGCCATTAATAACGCTGTCTTCCCTGGTTTACAGGGTGGTCCACATAACCACACAATAGGTGGACTAGCAGTTTGCCTGAAGTATGCACAATCTCCAGAGTTTAAGGCTTACCAAAACAATGTGGTCTCAAACTGTAGAGCTCTTGCAAACAGATTGCTGGAATTGGGATACAAGCTAGTTTCTGGTGGGAGTGATAACCACCTCGTTCTTGTGGATCTAAGACCAATGGGAATTGATGGTGCTCGAGTTGAGAAAATCCTTGACTTGGCTTCTATCACCTTGAATAAGAACTCTGTGCCAGGTGATAAAAGCGCCTTAGTCCCAGGTGGGATACGTATTGGATCACCTGCAATGACAACCCGGGGATTCACAGAGAGGGAATTTGTGGCAACAGCAGATTTCATTCACGAGGGTGTCCAAATAACTATTGAAGCAAGCAAGTTACTAGCCCCCAAAGCGAAGCTTCAAGAATTCTTGAAATTTGTGGCATCTCCGGATTTCCCCTTGCGAGATCACATTTCAGACCTTCAGAAGAGAGTTGAGGCTTTGACAACCCAGTTCCCGTTTTGCCCGGATTGTGAATGCAGTTCTGATTGTTTGGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_119816.p1 GENE.R_Transcript_119816~~R_Transcript_119816.p1 ORF type:complete len:551 (+),score=105.92,SHMT|PF00464.15|1.8e-190 R_Transcript_119816:133-1785(+)
MQACSGAATTSLMSSIHQPLLPEINSPSSLFSHSKGINKFTILPLKNYSSINFSRSSSSSSISNSLVTGRPPSSISVPAPDIAGDGSSFKDYGLNDADPEVHSIIGKEKQRQFRSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELEILCQQRALEAFHLDGEKWGVNVQPLSGSPANFEVYTALLNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVNYDMLEKTATLFRPKLIIAGASAYPRDFDYPRMRKIADVIGAFLMMDMAHISGLVAASVVGNPFEYCDIVTTTTHKSLRGPRGGMIFYKKDTILGVDLESAINNAVFPGLQGGPHNHTIGGLAVCLKYAQSPEFKAYQNNVVSNCRALANRLLELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDLASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEREFVATADFIHEGVQITIEASKLLAPKAKLQEFLKFVASPDFPLRDHISDLQKRVEALTTQFPFCPDCECSSDCLD*

Click here to download the sequence:
Link to NCBI Protein BLAST