Transcript Information: R_Transcript_119821.p1


Annotated TAIR IDAT4G32520.1
Annotated Gene Nameserine hydroxymethyltransferase 3
Annotated Gene Symbol(s)SHM3, AtSHMT3
Annotation TypeOrtholog
Chromosome Positionchr4:15689642-15692334 | Reverse length=529
E-Value1.1E-176
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.81542437254757
Replicate 20.36076117553777
Replicate 30.70845580194286
Condition 2: 8 Hour
Replicate 10.42071932899047
Replicate 20.61473214683672
Replicate 30.56139001918723
Condition 3: 24 Hour
Replicate 10.86782089176888
Replicate 20.5305388736565
Replicate 30.22564644007111


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_119821.p1 GENE.R_Transcript_119821~~R_Transcript_119821.p1 ORF type:5prime_partial len:291 (+),score=58.46,SHMT|PF00464.15|6.2e-127 R_Transcript_119821:2-874(+)
TCTGTCTCTGTTCCTGCCCCTGACATTGCAGGTAACGGAAGCAGCTTCAAAGACTATGGGCTCAATGATGCTGATCCCGAAGTGCATAGCATCATTGGTAAAGAAAAGCAAAGACAGTTTAGAAGTCTTGAGCTTATTGCATCAGAGAACTTCACATCTAGAGCCGTGATGGAAGCTGTTGGTTCTTGTCTCACAAACAAATATTCTGAAGGATTACCTGGGAAAAGGTATTATGGTGGCAATGAATATATTGATGAACTTGAGATCCTTTGTCAACAGAGGGCTTTGGAAGCATTTCATTTGGATGGGGAGAAGTGGGGTGTAAATGTTCAACCATTGTCTGGCTCGCCTGCAAATTTTGAGGTTTACACTGCACTCCTGAACCCACATGACCGAATCATGGGTCTAGATTTACCTCATGGAGGACATTTGTCTCATGGGTTTATGACTCCTAAAAGACGAGTCTCAGGAACATCAATTTACTTTGAATCTATGCCTTATCGCCTTGATGAGTCCACAGGTTTGGTCAATTATGACATGCTTGAGAAAACTGCCACTCTATTTCGACCAAAACTCATCATTAGTGGAGCTAGTGCATATCCTAGAGATTTTGACTATCCTCGAATGAGGAAGATTGCAGATGCAGTTGGCGCATTTCTTATGATGGACATGGCACATATAAGTGGGCTCGTTGCTGCTTCTGTAGTTGGCAACCCATTTGAGTACTGTGATATAGTGACCACGACAACTCACAAGTCTCTACGAGGTCCTAGAGGTGGAATGATCTTCTACAAGAAGGATACCATATTAGGAGTTGATTTAGAATCTGCCATTAAACGCTGTCTTCCCTGGTTTACAGGGTGGTCCACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_119821.p1 GENE.R_Transcript_119821~~R_Transcript_119821.p1 ORF type:5prime_partial len:291 (+),score=58.46,SHMT|PF00464.15|6.2e-127 R_Transcript_119821:2-874(+)
SVSVPAPDIAGNGSSFKDYGLNDADPEVHSIIGKEKQRQFRSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELEILCQQRALEAFHLDGEKWGVNVQPLSGSPANFEVYTALLNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVNYDMLEKTATLFRPKLIISGASAYPRDFDYPRMRKIADAVGAFLMMDMAHISGLVAASVVGNPFEYCDIVTTTTHKSLRGPRGGMIFYKKDTILGVDLESAIKRCLPWFTGWST*

Click here to download the sequence:
Link to NCBI Protein BLAST