Transcript Information: R_Transcript_119942.p1


Annotated TAIR IDAT4G00460.2
Annotated Gene NameRHO guanyl-nucleotide exchange factor 3
Annotated Gene Symbol(s)ATROPGEF3, ROPGEF3
Annotation TypeOrtholog
Chromosome Positionchr4:211146-213094 | Reverse length=473
E-Value8.6E-101
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.7526577580211
Replicate 22.5354023144209
Replicate 33.1118586923075
Condition 2: 8 Hour
Replicate 11.8479898073393
Replicate 21.2657102928973
Replicate 33.0823489732733
Condition 3: 24 Hour
Replicate 12.8588967491103
Replicate 22.3303669771176
Replicate 32.5604484728069


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_119942.p1 GENE.R_Transcript_119942~~R_Transcript_119942.p1 ORF type:5prime_partial len:265 (-),score=62.34,PRONE|PF03759.9|1e-100 R_Transcript_119942:1494-2288(-)
AGGTCTGTCACCGCTCCTCCTGCTTCACCTTCTAGGCTTGGTCTCAGGAGATACATGTACAGCATTGATGATAAGCTTGATGGATTTGAGCCTGTCGATATAGAGCTAGAACTGATGAAAGAAAGATTTTCAAAGCTTCTACTGGGTGAAGATATGTCAGGAAGTGGGAAAGGTGTTTGTTCTGCTGTCACAATCTCCAATGCCATAACTAATCTCTATGCTACCATATTTGGCAATGCTTTGAAGTTGGAACCTCTGAAGCCAGAGAAGAAGATGATGTGGAAAAAAGAAATGGATTGCCTTCTTTCTGTATGTGATTACATTATAGAGTATGTTCCTCAAGATGGAAATGACCTCGAGGTGTTGTCAATCAGGCCACGGACAGATATCCAAATGAATCTCCCTGCACTTAGAAAGCTGGACGGAATGCTCATGGACATATTGGATAGCTTCAAGGGCACAGAATTTTGGTATGCAGAACAAGGCAACATGTCTATGACTCCATCTAGAGCAACTTCGTTCAGGAAGGTTGTTACACGGACAGATGAGAAGTGGTGGCTGCCTATTCCCTGCATACCATCTGGTGGTCTCTCTGAGAAGGCAAGGAAACACTTGCGACAACAGCGCGATTGTGCCAATCAGATTCACAAAGCTGCCATGGCCATCAACAATAACACACTCAATGAGATGGAAGTCCCAGAATCTTACATTGCAGGTCTTCCAAAGGTTAGTTCTTTCAATTGTCCTGTCTCAACACATGGTTTCTCCTCTCAACTATTGATAGTACACAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_119942.p1 GENE.R_Transcript_119942~~R_Transcript_119942.p1 ORF type:5prime_partial len:265 (-),score=62.34,PRONE|PF03759.9|1e-100 R_Transcript_119942:1494-2288(-)
RSVTAPPASPSRLGLRRYMYSIDDKLDGFEPVDIELELMKERFSKLLLGEDMSGSGKGVCSAVTISNAITNLYATIFGNALKLEPLKPEKKMMWKKEMDCLLSVCDYIIEYVPQDGNDLEVLSIRPRTDIQMNLPALRKLDGMLMDILDSFKGTEFWYAEQGNMSMTPSRATSFRKVVTRTDEKWWLPIPCIPSGGLSEKARKHLRQQRDCANQIHKAAMAINNNTLNEMEVPESYIAGLPKVSSFNCPVSTHGFSSQLLIVHK*

Click here to download the sequence:
Link to NCBI Protein BLAST