Transcript Information: R_Transcript_119952.p1


Annotated TAIR IDAT3G14580.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:4903012-4904229 | Forward length=405
E-Value4E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.22816201193398
Replicate 20.52490751040745
Replicate 30.57266843990381
Condition 2: 8 Hour
Replicate 10.61214662368113
Replicate 20.83853306904446
Replicate 30
Condition 3: 24 Hour
Replicate 10.2869725903463
Replicate 21.1027629445289
Replicate 30.82078892575865


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_119952.p1 GENE.R_Transcript_119952~~R_Transcript_119952.p1 ORF type:internal len:80 (+),score=13.24,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|1.9e-07,PPR_2|PF13041.2|3.3e-09,PPR_2|PF13041.2|0.058,PPR|PF01535.16|0.018,PPR|PF01535.16|0.25 R_Transcript_119952:3-239(+)
AAGTTGTTCCTTCTCATTTGGGGTCTCACTTCAAGTGTCTCTGCACTTCATTTCTCCGGCACCGGCGTCAACTCAAGACCAACGCCTTTCTCCGGCGCAGGTTTGTGTAAACGTGATTGTTTGGAGGATGCTTTTGAAGTGCTAGATGAGTTTCCTAAACAAGGTTGCAAGCCAAATAAGCAAACTTTCTCGACCATAATGCACTATATGTGTCAAAAGGGCATGGTGGATGAGGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_119952.p1 GENE.R_Transcript_119952~~R_Transcript_119952.p1 ORF type:internal len:80 (+),score=13.24,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|1.9e-07,PPR_2|PF13041.2|3.3e-09,PPR_2|PF13041.2|0.058,PPR|PF01535.16|0.018,PPR|PF01535.16|0.25 R_Transcript_119952:3-239(+)
KLFLLIWGLTSSVSALHFSGTGVNSRPTPFSGAGLCKRDCLEDAFEVLDEFPKQGCKPNKQTFSTIMHYMCQKGMVDEA

Click here to download the sequence:
Link to NCBI Protein BLAST