Transcript Information: R_Transcript_119953.p1


Annotated TAIR IDAT3G14580.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:4903012-4904229 | Forward length=405
E-Value1.1E-133
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5615533570183
Replicate 21.9972090639893
Replicate 33.352205501876
Condition 2: 8 Hour
Replicate 14.1805135275784
Replicate 23.7086340614649
Replicate 34.1173165553561
Condition 3: 24 Hour
Replicate 13.3036844547184
Replicate 22.5820790896286
Replicate 34.3241562918017


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_119953.p1 GENE.R_Transcript_119953~~R_Transcript_119953.p1 ORF type:complete len:410 (+),score=66.84,PPR_2|PF13041.2|45,PPR_2|PF13041.2|2.8,PPR_2|PF13041.2|3.4e-12,PPR_2|PF13041.2|5.9e-13,PPR_2|PF13041.2|1.7e-14,PPR_2|PF13041.2|0.54,PPR_1|PF12854.3|8.3e+02,PPR_1|PF12854.3|5.5e+03,PPR_1|PF12854.3|1.6e-09,PPR_1|PF12854.3|6.3e-09,PPR_1|PF12854.3|1.2e-11,PPR_1|PF12854.3|1.3e+02,PPR_1|PF12854.3|2.1e+02,PPR|PF01535.16|6e+03,PPR|PF01535.16|2e+03,PPR|PF01535.16|2.6e-06,PPR|PF01535.16|0.00021,PPR|PF01535.16|1.8e-08,PPR|PF01535.16|3.5e+02,PPR|PF01535.16|32,PPR_3|PF13812.2|1.3e+03,PPR_3|PF13812.2|7.9e+02,PPR_3|PF13812.2|1.9e+02,PPR_3|PF13812.2|1.5e+02,PPR_3|PF13812.2|0.00065,PPR_3|PF13812.2|0.66,PPR_3|PF13812.2|4.9e-05,PPR_3|PF13812.2|9.7e+03 R_Transcript_119953:199-1428(+)
ATGGTAGTGGTAATTTGCCGCCGCTTGGCTTGTAACACCATACTTAGATCACCATATTTGGGCCCACCATTCAACCAAAAACTCACCTATTACAGATTAGCTTCATCATCCAAGACATTGTCTGGTTCATCGTCATCTTTTGGCACAGCCAAGCAACCTCCAATTGTAGATAAGTTGTATCACAAAGACTGGTTATCCCCAAATGAAGTGGTTAAAATCTTCCAAACAGCAGAACCCAGTTCAGTTCTTACTCTTTTGGATCACATTTCGAAGCGCAAGGATATCAAACCAAATGAAGCCCTTTACACTGTGATTGTTACCAAGCTTGGCCAAGTCAAAAACTTTGATGGGATTGACCGTATATTGAAAGCTATTAAAACCCAGAAAAATTGCAGCCTTTCTGATTGCTTTTTCTACAATGTGATGAAGATTTATGGCAATGTGGGTGGTCTAGTTGAACTGGCAACTGCGACCCTGTTTGATATGCCGAATTATAACTGTTGGCCTTCTGTGAAAACCTTCAATTTCGTGTTGAATTTGCTTGTCTTGTCGAAGAATTTCGATGCTGTTTCGAAAGTTTATCTAGGTGCTAGTAAATTGTGCGTGGAGACTGATACGTGCACACTGAATATTCTGATTAAAGGGTTGTGTAAACGTGGTTGTTTGGAGGATGCTTTTGAAGTGCTAGATGAGTTTCCTAAACAAGGTTGCAAGCCAAATAAGCAAACTTTCTCGACCATAATGCACTATATGTGTCAAAAGGGCATGGTGGATGAGGCATTTGGTTTGATTAAGAGGATGGACAAGGAAGAGGTTTCTCCTGATTCGGTCACCTTTAATATTTTGGTCTCTGGCCTGCAGAAACAAGGGAGAGTTGACGAGGCAATCAAGTTGTTAGATAGGATGAGACGCAAGGGTTGTGAGCCAAATAAAGGAACATATCAAGAGATCTTGTATGGGTTGCTTGGAGCTAAGAGATTCATTGATTCAAAAGACTTTGTGCATCAAATGAGATCAAAGGGCCTGATTCCAAGCTTCTTATCTTACAAGCTGCTGGTTCTGGGACTTTGCGACGAGGATTTGATAGGAGAGGTAGATTGGGTATTGCAGAGTATGGTGCTGGTTGGATTTGCCCCTAGGATGGGGATGTGGAGGAAAGTCCTTGGGAAGATGTTTTCTAGCCACAGCAGCCAAAACAGTGTGTGTTTGAGTGAAATTGTAAATGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_119953.p1 GENE.R_Transcript_119953~~R_Transcript_119953.p1 ORF type:complete len:410 (+),score=66.84,PPR_2|PF13041.2|45,PPR_2|PF13041.2|2.8,PPR_2|PF13041.2|3.4e-12,PPR_2|PF13041.2|5.9e-13,PPR_2|PF13041.2|1.7e-14,PPR_2|PF13041.2|0.54,PPR_1|PF12854.3|8.3e+02,PPR_1|PF12854.3|5.5e+03,PPR_1|PF12854.3|1.6e-09,PPR_1|PF12854.3|6.3e-09,PPR_1|PF12854.3|1.2e-11,PPR_1|PF12854.3|1.3e+02,PPR_1|PF12854.3|2.1e+02,PPR|PF01535.16|6e+03,PPR|PF01535.16|2e+03,PPR|PF01535.16|2.6e-06,PPR|PF01535.16|0.00021,PPR|PF01535.16|1.8e-08,PPR|PF01535.16|3.5e+02,PPR|PF01535.16|32,PPR_3|PF13812.2|1.3e+03,PPR_3|PF13812.2|7.9e+02,PPR_3|PF13812.2|1.9e+02,PPR_3|PF13812.2|1.5e+02,PPR_3|PF13812.2|0.00065,PPR_3|PF13812.2|0.66,PPR_3|PF13812.2|4.9e-05,PPR_3|PF13812.2|9.7e+03 R_Transcript_119953:199-1428(+)
MVVVICRRLACNTILRSPYLGPPFNQKLTYYRLASSSKTLSGSSSSFGTAKQPPIVDKLYHKDWLSPNEVVKIFQTAEPSSVLTLLDHISKRKDIKPNEALYTVIVTKLGQVKNFDGIDRILKAIKTQKNCSLSDCFFYNVMKIYGNVGGLVELATATLFDMPNYNCWPSVKTFNFVLNLLVLSKNFDAVSKVYLGASKLCVETDTCTLNILIKGLCKRGCLEDAFEVLDEFPKQGCKPNKQTFSTIMHYMCQKGMVDEAFGLIKRMDKEEVSPDSVTFNILVSGLQKQGRVDEAIKLLDRMRRKGCEPNKGTYQEILYGLLGAKRFIDSKDFVHQMRSKGLIPSFLSYKLLVLGLCDEDLIGEVDWVLQSMVLVGFAPRMGMWRKVLGKMFSSHSSQNSVCLSEIVND*

Click here to download the sequence:
Link to NCBI Protein BLAST