Transcript Information: R_Transcript_119982.p1


Annotated TAIR IDAT5G12440.1
Annotated Gene NameCCCH-type zinc fingerfamily protein with RNA-binding domain
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4035891-4038604 | Reverse length=650
E-Value3E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5295777336356
Replicate 20.82108437382171
Replicate 30.89579420767077
Condition 2: 8 Hour
Replicate 11.7783030408614
Replicate 21.6239746588571
Replicate 31.3182733970113
Condition 3: 24 Hour
Replicate 11.9238385945003
Replicate 21.3553511050075
Replicate 32.3232759164863


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_119982.p1 GENE.R_Transcript_119982~~R_Transcript_119982.p1 ORF type:5prime_partial len:179 (+),score=52.26 R_Transcript_119982:2-538(+)
AAGGGGAAACTTTCTGACAAGAAACAACACCAGCAGCAACTGGGAAGGGGAGATTTCTCATGCCCTAGCTCTTCTGAACTTGATTGTAGAGAGCCTTTTGAATATGAGCTTGGGGGGAGAGTGTTTTACAATGCTCAAAAGATGCTGCTAAAGAAAAAGCTTGAGGAGGAAGCTCTTGAGCTACAAGGTAGGAGGCTGATGAATTTGCAGCTCATGGTTTTGAAGAATCATCAGCACTACCAGCAGACTGTTGGGTCTCCGATACCATCTCCGAATCTGTCTCAGGCGTCATTGAATCTTACTGCAGCAAACCTGTCTGATGGGATAAGAAAAGATGTCTCAGAAGAAAACAAACAATGTCGAACTGGAGCACCTGATCAGCAGCCATGTGAAGGAGACAAGGCGGCTCCACGTGATGATGGCAACGACAATGTCCAAGACAAGGAGAGTAACCTTGTCAATGATGAATGCAAACTTCCTGAAAGGTATAACAATGGGATATTCAATATTTCAATATATATTTTTACCTACATTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_119982.p1 GENE.R_Transcript_119982~~R_Transcript_119982.p1 ORF type:5prime_partial len:179 (+),score=52.26 R_Transcript_119982:2-538(+)
KGKLSDKKQHQQQLGRGDFSCPSSSELDCREPFEYELGGRVFYNAQKMLLKKKLEEEALELQGRRLMNLQLMVLKNHQHYQQTVGSPIPSPNLSQASLNLTAANLSDGIRKDVSEENKQCRTGAPDQQPCEGDKAAPRDDGNDNVQDKESNLVNDECKLPERYNNGIFNISIYIFTYI*

Click here to download the sequence:
Link to NCBI Protein BLAST