Transcript Information: R_Transcript_120113.p1


Annotated TAIR IDAT1G54310.2
Annotated Gene NameS-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:20273567-20275449 | Forward length=454
E-Value7.1E-227
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6902725408453
Replicate 23.2407333251243
Replicate 32.9878353386286
Condition 2: 8 Hour
Replicate 13.8858003068454
Replicate 23.2569110507814
Replicate 32.8805816854092
Condition 3: 24 Hour
Replicate 14.1423869563031
Replicate 24.0754282732588
Replicate 34.5202868375114


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_120113.p1 GENE.R_Transcript_120113~~R_Transcript_120113.p1 ORF type:complete len:460 (+),score=108.13,Methyltrans_SAM|PF10672.5|3.5e-19,Methyltransf_31|PF13847.2|1.5e-11,Cons_hypoth95|PF03602.11|1.5e-09,Methyltransf_18|PF12847.3|1.4e-09,Met_10|PF02475.12|2.5e-08,MTS|PF05175.10|4e-07,PrmA|PF06325.9|1.7e-06 R_Transcript_120113:162-1541(+)
ATGGTGACACTAACACTACATCCCTCCCGCTTAGTCAAGTGCCTCTCTTTTGCCTCATCTCCTGCTCCAGCCACTTCCCTCCAGGAAATCGCTTCTTCCTCCCCCAAAGAAGTTGCAAAGGTTGTCTTGAAGAAAGGAAAAACTCAACTCTTCAGGAATGGAAGTCCTATGGTTTACAGTGGGGCAGTTGATAGAATTATTGGTAGACCACCTCCTAAGACTGGAAAAGTTGTTTTGGTAGCTGATGGAACAGAAAAGCCGGTTGGGTGGGGCTTATACAATTCTGTTTCTATGTTTTGTGTTCGTCTTATGCAGCTTGAGGAGGAAGCAATAAGAGATCCTACTTGTGCGCTTAACATGGAGAGACTAATTGAACATAGGATTAATGCAGCCTCAGAATTACGAAGACATTTGGGACTTCCTTCAGAAAGTACAAATGCCTACCGTCTTGTGAACAGTGAAGGAGACAGGTTGTCTGGACTAATTGTTGATGTGTTTGATGATGTAGCTGTTGTTGCATCCTCTGCTGCTTGGGTTGAGAAGTACAAGCCACAAATAGAGGCTTGTATCAATAAAGTTGACGGAATTAATCATATCAACTGGAGACCTTCAATTGAAATATTAAAAGAAGAGGGTTTAGACTTTTTAAAAATGAAACATGCAACATCTACAGCACCTCTTACTCGGGTAAAGGTCAAGGAAAATGGCATTAACTATGCTGTCTCACTCGAGGGGCAAAAGACAGGATTTTATGCTGATCAGCGTGAAAGCCGGCAGTTCATATCAAAAATTGCACATGGCAGGAGAGTCCTTGATATGTGCTGCTACAGTGGTGGATTTGCTTTAAATGCAGCATATGGTGGTGCTGCCTTTGTGACTGGTGTTGACTCATCTCTTCCTGCTGTGGAGCTTGCAAAGGAGAACATTGTTCTCAACAACCTAGATCTTGAGGCAATATCATTTTTGAAGCAAGATGCAACTGAGTTTATGAAGAATGCTGCAGATCGGAAGGAAATGTGGGATATTGTCATTTTGGACCCTCCCAAATTGGCTCCTAGAAAGGAGGTTCTGCAAAATGCATCTGGAATGTATAGGAATTTAAATGCATTGGCTATGAGACTAATCAAAGAGGGTGGTCTCTTGATGACTTGCTCTTGTTCTGGCGCTATGACACAAAGTGGGACGTTCATGCGTGTTATTCAGGGTGCTGCAACAATGGCTGGTAGAAAGGTGACTATCCTCCGACAAACGGGAGCTTCATGTGATCATCCAATTGATCCATCCTACCCAGAAGGCGCATACCTTTCCAACATCTTGCTCAGAGTATTACGACAACAATTTTTGATGATCAAAATGAGCATACCAATTTTGAACAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_120113.p1 GENE.R_Transcript_120113~~R_Transcript_120113.p1 ORF type:complete len:460 (+),score=108.13,Methyltrans_SAM|PF10672.5|3.5e-19,Methyltransf_31|PF13847.2|1.5e-11,Cons_hypoth95|PF03602.11|1.5e-09,Methyltransf_18|PF12847.3|1.4e-09,Met_10|PF02475.12|2.5e-08,MTS|PF05175.10|4e-07,PrmA|PF06325.9|1.7e-06 R_Transcript_120113:162-1541(+)
MVTLTLHPSRLVKCLSFASSPAPATSLQEIASSSPKEVAKVVLKKGKTQLFRNGSPMVYSGAVDRIIGRPPPKTGKVVLVADGTEKPVGWGLYNSVSMFCVRLMQLEEEAIRDPTCALNMERLIEHRINAASELRRHLGLPSESTNAYRLVNSEGDRLSGLIVDVFDDVAVVASSAAWVEKYKPQIEACINKVDGINHINWRPSIEILKEEGLDFLKMKHATSTAPLTRVKVKENGINYAVSLEGQKTGFYADQRESRQFISKIAHGRRVLDMCCYSGGFALNAAYGGAAFVTGVDSSLPAVELAKENIVLNNLDLEAISFLKQDATEFMKNAADRKEMWDIVILDPPKLAPRKEVLQNASGMYRNLNALAMRLIKEGGLLMTCSCSGAMTQSGTFMRVIQGAATMAGRKVTILRQTGASCDHPIDPSYPEGAYLSNILLRVLRQQFLMIKMSIPILNK*

Click here to download the sequence:
Link to NCBI Protein BLAST