Transcript Information: R_Transcript_120117.p1


Annotated TAIR IDAT1G05670.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:1698574-1700799 | Reverse length=741
E-Value1.2E-306
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9634659194319
Replicate 20.75285539341308
Replicate 31.5818729814076
Condition 2: 8 Hour
Replicate 11.1056034637534
Replicate 21.9005264778697
Replicate 32.3382552857603
Condition 3: 24 Hour
Replicate 12.1037034511442
Replicate 21.2008839502174
Replicate 32.0637809200129


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_120117.p1 GENE.R_Transcript_120117~~R_Transcript_120117.p1 ORF type:complete len:753 (+),score=124.11,PPR_2|PF13041.2|5.7e+03,PPR_2|PF13041.2|2.2e+02,PPR_2|PF13041.2|3.8e+02,PPR_2|PF13041.2|4e-14,PPR_2|PF13041.2|3.6e-10,PPR_2|PF13041.2|1.6e-13,PPR_2|PF13041.2|3e-16,PPR_2|PF13041.2|1.3e-18,PPR_2|PF13041.2|9.8e-16,PPR_2|PF13041.2|6.8e-18,PPR_2|PF13041.2|8.6e-18,PPR_2|PF13041.2|1.5e-17,PPR_2|PF13041.2|1.3e-15,PPR_2|PF13041.2|9.3e-12,PPR_2|PF13041.2|4.9e-08,PPR_2|PF13041.2|2.7e-07,PPR_1|PF12854.3|2.6e+03,PPR_1|PF12854.3|7.1e-05,PPR_1|PF12854.3|2.5e-08,PPR_1|PF12854.3|9.1e-10,PPR_1|PF12854.3|3.3e-12,PPR_1|PF12854.3|2.9e-09,PPR_1|PF12854.3|1.4e-10,PPR_1|PF12854.3|1e-11,PPR_1|PF12854.3|6.1e-13,PPR_1|PF12854.3|1.6e-10,PPR_1|PF12854.3|3.6e-09,PPR_1|PF12854.3|7.3e-05,PPR_1|PF12854.3|0.004,PPR_1|PF12854.3|0.01,PPR|PF01535.16|1.3e+03,PPR|PF01535.16|21,PPR|PF01535.16|2.1e+02,PPR|PF01535.16|3.8e-05,PPR|PF01535.16|0.002,PPR|PF01535.16|2e-05,PPR|PF01535.16|3.6e-08,PPR|PF01535.16|3.2e-08,PPR|PF01535.16|1.1e-08,PPR|PF01535.16|8.1e-07,PPR|PF01535.16|6.8e-07,PPR|PF01535.16|3.9e-08,PPR|PF01535.16|7.3e-05,PPR|PF01535.16|0.026,PPR|PF01535.16|8.4e-05,PPR|PF01535.16|1.4e-06,PPR|PF01535.16|1.5e+03,PPR_3|PF13812.2|5.7e+02,PPR_3|PF13812.2|3.6e+03,PPR_3|PF13812.2|9.9e+03,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|0.62,PPR_3|PF13812.2|0.0026,PPR_3|PF13812.2|2.1e-05,PPR_3|PF13812.2|0.00014,PPR_3|PF13812.2|0.035,PPR_3|PF13812.2|0.00013,PPR_3|PF13812.2|6.3e-05,PPR_3|PF13812.2|2.5e-07,PPR_3|PF13812.2|0.0024,PPR_3|PF13812.2|0.0013,PPR_3|PF13812.2|15,PPR_3|PF13812.2|0.0012 R_Transcript_120117:358-2616(+)
ATGGAAATGAAGAGGGGTGCCATCTCCTTGTCCAGTTACTGTTCAAGGCTGGTGAGTCGGAGTCCACACTTGGGTCGTTTTATGTGTGTGTTATTCAAGGAAAGGACTTTGAGCATAAAGTTATGCGCTTTCTACTCGACTAGTACACGGCCATTTCCAGATTACTCGCCTAGAAAACCAAGTATCAAAGACTCTGAACTTGTTCATTACATTTCAAACGCTCTTAAGCAACGCCGTTCAGAGAAATCAGGGCTTGTTCTGAGACCTTTTGTGTCAAAGTTCAGGTCTGACCATGCCATTTGGGTGTTGATGAACATCAGGCATGATTACAAATTGGTTTTGGACTTTTACAAGTGGGCTTGCTTGCATAGAGAACTGTCGTTGGAAGTATGGAGTATTGTCATTCATCTAGCTGTTGCTTCCAAAGATTCAAAGATGGCTCGTGATCTTATGTATGATTTTTGGGAAAAGCCCAATCTGGATATCAACTATTCTTTTTCTTGTTTTGTTGAAAGTTTGATCTACACTTACAAGGAATGGAGTTCAGATCCCCGTGTTTTTGATCTGTTTTTTGAGGTCCTTGTTGAAATTGGTCTCCTTATAGAGGCAAGGACATATTTTGAAAAGATGTTGAATTATGGTTTGGTGATCTCCGCTGACTCCTGCATTATGCTTCTTTCTCGTCTTGCAAGTCACTTGGATGCGCAAAAGGAGGCGTTTGAGGTTTTTTGTGAGTTCCTTGAAGCAGGTGTTTGCTGGGATACAGAAGCCTATAATACAATAATCCATATTCTTTGTCGGTTAGGGAAAATAAAAGAAGCCCACCATTTGATATTGCAAATGGAGTTAAGAGGCTGTATGCCTGATGTTGTAAGTTTTAGTACAGTTATTAATGGATATTGTAATGTTGGTGGACTAGAAAGGGTGCTGAGGCTTGTTCATGTAATGGAGTTGAAGGGGTTGAAGCTGAATGTATTTACTTACAACAGCATTATTTTTCTTATGTGTAAATCTGGTAAATTATCTGAAGCAGAAATAGTTTTGAGGGAGATGATTAGTCAGAGAACACTGCCAGACAATGTTGTCTACACAACTATCATCGATGGTTTCTGTAAGTCAGGTAATGTCACAGCGGCTATCAAGCTTTTTGAGGAAATGCAAAGTCTTAAAGTGTTCCCTGATTGTATCACATATACTGCTATTATATGTGGGCTCTGTCAATGCGGAAACATGGTAGAAGCAGACAAGCTTTTCCACCAAATGCTTGACAGAGGAGTAGCACCCGATGAAATTACGTATACAACACTTATAGATGGTTGCTGCAAGGTAGGTAAGCTGAAAGAGGCTTTCTTTTGGCACAATAAGATGGTCAAGATGGGTTTGACCCCAAATGTTGTCACCTATACTGCGCTTGCTGACGGCCTTTGTAAACAAGGTGAGGTTGAAACAGCCAACGAGCTTTTGCATGAAATGTCTTCCAAGGGACTAGAACTTAATGTGTGCACATACAATGTGCTACTTAATGGTCTCTGTAAAGCCGGGAATATAAAGCAGGCGATGAAATTGATGGAGGACATGGAGGTGACAGGATTTGATCCTGACACCATTACTTATACTACTCTGATGGATGCTTATTGCAAGTCAGGGGAGATGCCTGCAGCCCATGAGCTCCTGAGGAGAATGCTGGATCGAGGACTTCAACCCACTGTTGTTACATTTAATGTGTTGATGAATGGCTTCTGCATGTCAGGGAAGTTGGATGATGGTGACAGGCTTCTGAAATGGATGCTAGAGAAGGGTGTTATGCCAAATGTCACGACGTACAATACTCTTATGAAGCAGTACTGCATCAGAAACAACATGCGTGTCACAACTGAAATTTACAGGGAGATGTGTGCTCGAAATGTGAAGCCGGACAGAAACACGTATAATATACTAATTATTGGGCATACTAAAGCAAGAAATATGATAGAAGCATGGTATTTACACAAAGAAATGGCTGCAAAAGGCTTCGATCTCCCTGCCACTACCTATAATATTTTTATCAAGGGGCTTCTGAAAAGGAGAAAGTATGCGGAGGCGAAGGAGCTCTTTGCTGAGATGAGGAGAAAAGGCTTTATTGCAGATCAAGAAATATACAGCTTTTTTCTAGATAAAAACTTTGATGAAGGGAACATGGGAATGGCTCTTGATCTTTGTGATGAAACAATAGAGAGATTCCTTGCAGATAAGGTTTATGAAGGGAACAACCCTGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_120117.p1 GENE.R_Transcript_120117~~R_Transcript_120117.p1 ORF type:complete len:753 (+),score=124.11,PPR_2|PF13041.2|5.7e+03,PPR_2|PF13041.2|2.2e+02,PPR_2|PF13041.2|3.8e+02,PPR_2|PF13041.2|4e-14,PPR_2|PF13041.2|3.6e-10,PPR_2|PF13041.2|1.6e-13,PPR_2|PF13041.2|3e-16,PPR_2|PF13041.2|1.3e-18,PPR_2|PF13041.2|9.8e-16,PPR_2|PF13041.2|6.8e-18,PPR_2|PF13041.2|8.6e-18,PPR_2|PF13041.2|1.5e-17,PPR_2|PF13041.2|1.3e-15,PPR_2|PF13041.2|9.3e-12,PPR_2|PF13041.2|4.9e-08,PPR_2|PF13041.2|2.7e-07,PPR_1|PF12854.3|2.6e+03,PPR_1|PF12854.3|7.1e-05,PPR_1|PF12854.3|2.5e-08,PPR_1|PF12854.3|9.1e-10,PPR_1|PF12854.3|3.3e-12,PPR_1|PF12854.3|2.9e-09,PPR_1|PF12854.3|1.4e-10,PPR_1|PF12854.3|1e-11,PPR_1|PF12854.3|6.1e-13,PPR_1|PF12854.3|1.6e-10,PPR_1|PF12854.3|3.6e-09,PPR_1|PF12854.3|7.3e-05,PPR_1|PF12854.3|0.004,PPR_1|PF12854.3|0.01,PPR|PF01535.16|1.3e+03,PPR|PF01535.16|21,PPR|PF01535.16|2.1e+02,PPR|PF01535.16|3.8e-05,PPR|PF01535.16|0.002,PPR|PF01535.16|2e-05,PPR|PF01535.16|3.6e-08,PPR|PF01535.16|3.2e-08,PPR|PF01535.16|1.1e-08,PPR|PF01535.16|8.1e-07,PPR|PF01535.16|6.8e-07,PPR|PF01535.16|3.9e-08,PPR|PF01535.16|7.3e-05,PPR|PF01535.16|0.026,PPR|PF01535.16|8.4e-05,PPR|PF01535.16|1.4e-06,PPR|PF01535.16|1.5e+03,PPR_3|PF13812.2|5.7e+02,PPR_3|PF13812.2|3.6e+03,PPR_3|PF13812.2|9.9e+03,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|0.62,PPR_3|PF13812.2|0.0026,PPR_3|PF13812.2|2.1e-05,PPR_3|PF13812.2|0.00014,PPR_3|PF13812.2|0.035,PPR_3|PF13812.2|0.00013,PPR_3|PF13812.2|6.3e-05,PPR_3|PF13812.2|2.5e-07,PPR_3|PF13812.2|0.0024,PPR_3|PF13812.2|0.0013,PPR_3|PF13812.2|15,PPR_3|PF13812.2|0.0012 R_Transcript_120117:358-2616(+)
MEMKRGAISLSSYCSRLVSRSPHLGRFMCVLFKERTLSIKLCAFYSTSTRPFPDYSPRKPSIKDSELVHYISNALKQRRSEKSGLVLRPFVSKFRSDHAIWVLMNIRHDYKLVLDFYKWACLHRELSLEVWSIVIHLAVASKDSKMARDLMYDFWEKPNLDINYSFSCFVESLIYTYKEWSSDPRVFDLFFEVLVEIGLLIEARTYFEKMLNYGLVISADSCIMLLSRLASHLDAQKEAFEVFCEFLEAGVCWDTEAYNTIIHILCRLGKIKEAHHLILQMELRGCMPDVVSFSTVINGYCNVGGLERVLRLVHVMELKGLKLNVFTYNSIIFLMCKSGKLSEAEIVLREMISQRTLPDNVVYTTIIDGFCKSGNVTAAIKLFEEMQSLKVFPDCITYTAIICGLCQCGNMVEADKLFHQMLDRGVAPDEITYTTLIDGCCKVGKLKEAFFWHNKMVKMGLTPNVVTYTALADGLCKQGEVETANELLHEMSSKGLELNVCTYNVLLNGLCKAGNIKQAMKLMEDMEVTGFDPDTITYTTLMDAYCKSGEMPAAHELLRRMLDRGLQPTVVTFNVLMNGFCMSGKLDDGDRLLKWMLEKGVMPNVTTYNTLMKQYCIRNNMRVTTEIYREMCARNVKPDRNTYNILIIGHTKARNMIEAWYLHKEMAAKGFDLPATTYNIFIKGLLKRRKYAEAKELFAEMRRKGFIADQEIYSFFLDKNFDEGNMGMALDLCDETIERFLADKVYEGNNPG*

Click here to download the sequence:
Link to NCBI Protein BLAST