Transcript Information: R_Transcript_120171.p1


Annotated TAIR IDAT5G61670.1
Annotated Gene NameEncodes a close Homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons.
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24783629-24785201 | Forward length=307
E-Value3.4E-163
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 141.721053610786
Replicate 230.646773899565
Replicate 336.565413429883
Condition 2: 8 Hour
Replicate 136.500668244341
Replicate 246.457856993022
Replicate 342.955053704146
Condition 3: 24 Hour
Replicate 138.429372968113
Replicate 229.7266532873
Replicate 336.638114367198


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_120171.p1 GENE.R_Transcript_120171~~R_Transcript_120171.p1 ORF type:complete len:322 (+),score=52.84 R_Transcript_120171:152-1117(+)
ATGCTCTGGTCAGGTCGAATTTTGGCGGTTTCTCAGTTAACCCTAACCCTAACTAAAAAACCCTCGATTGATAAAAATCATCATCAAACCTCCAGATTGTGCCGTAAAAAGCTCGAATTTTCTTCGAGATGGCGGTGTATGGCTTCTTCGATGGCTTCCGATTCCGATCCTTCTTCTTCTTCTTCCTTTCCCTCTGCTTCTCTCGATTCCGATCGAAATAATTCCGCTTTTTGTATTATAGAAGGGCCTGAAACAGTTGAAGATTTTGCAAAAATGGAATTGCAAGAAATTCAAGATAATATACGAAGCCGCAGGAATAAAATCTTCTTGCATATGGAAGAGGTTCGCCGGCTGCGGATACAACAGAGGATCAAAAGTGCTGAAGCTGGAAATCTACAAGAGGAACAGGAAAATGAACTCCCAAACTTCCCATCATTCATACCTTTTCTGCCTCCCCTGAATCCAGCTAATCTAAAGCAGTACTATGCGACTTGTTTCTCTCTTATTGCTGGAATTATGTTGTTTGGAGGTCTTCTTGCACCTTCTTTGGAGCTTAAACTGGGATTGGGAGGCACGTCATATGCAGATTTCATCAGAAGCATGCATTTGCCCATGCAGTTAAGTGATGTAGATCCAATTGTAGCATCCTTCTCTGGTGGAGCTGTTGGAGTGATCTCAGCACTGATGGTGGTTGAAATTAACAATGTAAAACAGCAGGAGCATAAAAGATGCAAATACTGTCTTGGAACTGGCTATCTAGCATGTGCTCGCTGTTCTAGCACTGGAGCTGTTGTTTTGATTGAACCCATCGCAACAGTGAATTGCGGAGATCAATCTCTTTCGCCACCAAAGACTGAAAGGTGTACAAATTGCGCAGGATCTGGAAAGGTTATGTGTCCTACTTGTCTCTGTACTGGGATGGCAATGGCAAGTGAACATGACCCGAGAATCGATCCATTTGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_120171.p1 GENE.R_Transcript_120171~~R_Transcript_120171.p1 ORF type:complete len:322 (+),score=52.84 R_Transcript_120171:152-1117(+)
MLWSGRILAVSQLTLTLTKKPSIDKNHHQTSRLCRKKLEFSSRWRCMASSMASDSDPSSSSSFPSASLDSDRNNSAFCIIEGPETVEDFAKMELQEIQDNIRSRRNKIFLHMEEVRRLRIQQRIKSAEAGNLQEEQENELPNFPSFIPFLPPLNPANLKQYYATCFSLIAGIMLFGGLLAPSLELKLGLGGTSYADFIRSMHLPMQLSDVDPIVASFSGGAVGVISALMVVEINNVKQQEHKRCKYCLGTGYLACARCSSTGAVVLIEPIATVNCGDQSLSPPKTERCTNCAGSGKVMCPTCLCTGMAMASEHDPRIDPFD*

Click here to download the sequence:
Link to NCBI Protein BLAST