Transcript Information: R_Transcript_120311.p2


Annotated TAIR IDATCG00860.1
Annotated Gene NameChloroplast Ycf2;ATPase, AAA type, core
Annotated Gene Symbol(s)YCF2.1
Annotation TypeOrtholog
Chromosome PositionchrC:86474-93358 | Forward length=2294
E-Value1.3E-95
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0879248251157
Replicate 20
Replicate 31.061901742868
Condition 2: 8 Hour
Replicate 10.32431609201649
Replicate 20
Replicate 30.96167473485494
Condition 3: 24 Hour
Replicate 10.9122307507697
Replicate 21.022429220093
Replicate 30.57980674667278


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_120311.p2 GENE.R_Transcript_120311~~R_Transcript_120311.p2 ORF type:5prime_partial len:151 (+),score=9.00,DUF825|PF05695.8|6.2e-89 R_Transcript_120311:3-455(+)
CCGATCCGCAAGGACCATGATTGGGAATTGTTTGATCGTCTTTCTCTGAGGAAGAGGCGAAACATAATCAACTTGAATTCGGGACAGCTTTTCGAAATCTTAGTGAAGCACTGGATTTGTTATCTTATGTCTGCTTTTTGTGAAAAAATACCAATTGAAGTGGAGGGTTTCTTCAAACAACAAGGGGCTGGGTCAACTATTCAATCAAATGATATTGAGCGTGTTTCCCACCTCTTCTCGAGAAACAAGTGGGCTATTTCTTTGCAAAATTGTGCTCAATTTCATATGTGGCAATTCCACCAAGATCTCTTCGTTAGTTGGGGGAAGAATCCGTACGAATCGGATTTGTTGAGGAACATATCGAGAGAGAATTGGATTTGGTTAGACAGTGTGTGGTTGGTAAACAAGGATCGTTTTTATAAATTAATAGGGCAAATGTTACTGCAACTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_120311.p2 GENE.R_Transcript_120311~~R_Transcript_120311.p2 ORF type:5prime_partial len:151 (+),score=9.00,DUF825|PF05695.8|6.2e-89 R_Transcript_120311:3-455(+)
PIRKDHDWELFDRLSLRKRRNIINLNSGQLFEILVKHWICYLMSAFCEKIPIEVEGFFKQQGAGSTIQSNDIERVSHLFSRNKWAISLQNCAQFHMWQFHQDLFVSWGKNPYESDLLRNISRENWIWLDSVWLVNKDRFYKLIGQMLLQL*

Click here to download the sequence:
Link to NCBI Protein BLAST