Transcript Information: R_Transcript_120312.p1


Annotated TAIR IDATCG00860.1
Annotated Gene NameChloroplast Ycf2;ATPase, AAA type, core
Annotated Gene Symbol(s)YCF2.1
Annotation TypeOrtholog
Chromosome PositionchrC:86474-93358 | Forward length=2294
E-Value1.7E-201
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.96968855071943
Replicate 20.98420158201397
Replicate 30.64425199489179
Condition 2: 8 Hour
Replicate 11.2242932473623
Replicate 21.1180440920593
Replicate 31.5882659292839
Condition 3: 24 Hour
Replicate 11.3631198041449
Replicate 21.309530996628
Replicate 32.8043621630087


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_120312.p1 GENE.R_Transcript_120312~~R_Transcript_120312.p1 ORF type:5prime_partial len:320 (+),score=32.53,DUF825|PF05695.8|4.1e-194 R_Transcript_120312:3-962(+)
CCGATCCGCAAGGACCATGATTGGGAATTGTTTGATCGTCTTTCTCTGAGGAAGAGGCGAAACATAATCAACTTGAATTCGGGACAGCTTTTCGAAATCTTAGTGAAGCACTGGATTTGTTATCTTATGTCTGCTTTTTGTGAAAAAATACCAATTGAAGTGGAGGGTTTCTTCAAACAACAAGGGGCTGGGTCAACTATTCAATCAAATGATATTGAGCGTGTTTCCCACCTCTTCTCGAGAAACAAGTGGGCTATTTCTTTGCAAAATTGTGCTCAATTTCATATGTGGCAATTCCACCAAGATCTCTTCGTTAGTTGGGGGAAGAATCCGTACGAATCGGATTTGTTGAGGAACATATCGAGAGAGAATTGGATTTGGTTAGACAGTGTGTGGTTGGTAAACAAGGATCGTTTTTTTAGCAAGGTACGGAATGTATCGTCAAATATTCAATATGATTCCACAAGATCTAGTTTCGTTCAAGTAACGAATTCTAGCCAATTGAAAGGATCTTCTGATCAATCTAGAGATCGTTTGGATTCCATTAGGAATGCGGATTCGGAATATCATACATTACTCAATAAAAGGGAGATTCAACAACTAAAAGAAAGATCGATTCTTCGGGATCCTTCCTTTCTTCAAACGGAAGGAACAGAGATAGAATCAGACCTATTCCCGAAATGCCTTTCTGGATATTCCTCAATGTTTCGGCTATTCACGGAACGTGAGAAGCAGATGAATAATCATCTGCTTCCGGAAGAAATCGAAGAACTTCTTGAGAATCCTACAAGATCCATTCGTTCTTTTTTCTCTGGCAGATGGTCAGAACTTCATCTGGGTTCAAATCCTACTGAGAGGTCCACTAGAGATCAGAAATTGTTGAAGAAACAACAAGATGTTTCTTTTGCCCCTTCCAGGCGATCAGAAAATAAAGACAAAGTAAGTTCGGTTGGAAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_120312.p1 GENE.R_Transcript_120312~~R_Transcript_120312.p1 ORF type:5prime_partial len:320 (+),score=32.53,DUF825|PF05695.8|4.1e-194 R_Transcript_120312:3-962(+)
PIRKDHDWELFDRLSLRKRRNIINLNSGQLFEILVKHWICYLMSAFCEKIPIEVEGFFKQQGAGSTIQSNDIERVSHLFSRNKWAISLQNCAQFHMWQFHQDLFVSWGKNPYESDLLRNISRENWIWLDSVWLVNKDRFFSKVRNVSSNIQYDSTRSSFVQVTNSSQLKGSSDQSRDRLDSIRNADSEYHTLLNKREIQQLKERSILRDPSFLQTEGTEIESDLFPKCLSGYSSMFRLFTEREKQMNNHLLPEEIEELLENPTRSIRSFFSGRWSELHLGSNPTERSTRDQKLLKKQQDVSFAPSRRSENKDKVSSVGS*

Click here to download the sequence:
Link to NCBI Protein BLAST