Transcript Information: R_Transcript_120401.p1


Annotated TAIR IDAT5G52450.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21289042-21291749 | Reverse length=486
E-Value4.4E-179
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4524902616487
Replicate 20.77970346373521
Replicate 31.0329298120281
Condition 2: 8 Hour
Replicate 10.64949243891897
Replicate 21.2455663625064
Replicate 32.1184903641831
Condition 3: 24 Hour
Replicate 11.8877772521454
Replicate 21.813562402143
Replicate 31.7997847355274


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_120401.p1 GENE.R_Transcript_120401~~R_Transcript_120401.p1 ORF type:complete len:377 (+),score=33.39,MatE|PF01554.14|2.6e-13,MatE|PF01554.14|3.1e+03,MatE|PF01554.14|6.4e-28,MatE|PF01554.14|7.9e+02 R_Transcript_120401:960-2090(+)
ATGGTAGGCATAAACACGCAAAGGGCCATGGTTGTGCTTTTGCTGGTAAGCATACCGATATCTATAGTCTGGGCAAACACCGGATCCATACTACTTGTTCTAGGACAAGACGAGAGGATATCAAAAGAAGCCGGAAACTATATCCTCATGATGATGCCTAGTCTCTTTGCCTATAGCCTTCTTCAATGCTTTTTTCGATTCTTTCAAACCCAAAACGTCATCTTTCCAATGCTGCTCAGCTCTGGAATCACTACCTTATTGCACATATTCATATGTTGGACTTTGGTATTTAAATCTGGTCTCGGAAGCAGAGGAGCTGCCCTAGCCAACACTATTTCATACTGGATTAATCTAATCATATTGGTCCTTTATGTGAAATTTTCTTCCTTGTTCTCAAAGACTTGGACCGGCTTCTCAAATGCAGCGTTTCAAGGTATCCCATCATTTCTGAGGCTTGCTATTCCCTCGACTTTCATGGTCTGCTTGGAACTTTGGTCCTTCGAGATGCTAGTTTTCTTGTCTGGTCTTCTACCCAGTCCACAATTAGAAACTTCAGTTCTATCTATCTGTGTTAACACTACTTCAATTGTTTGGGTTATTCCTGAAGGTCTCAGTGGAGCTGTCAGCACTCGCATATCCAACGAGTTGGGAGCTAGGAATCCACGAGGGGCAAGCTTAGCAATACGGGTTGCATTATGCATGACAATCTTGGAGAGCATTCTTGTTGGCTTAGTCTTGTTACTCATACGAGATGTTTGGGGCTATGCTTACAGCAGTGAGATGGAAGTGGTCAGATTTTTAGCTGCTATGATGCCCTTATTAGCTGCAACCAATTTCCTGGATGGCCTAACATGTGTCCTCTCTGGTGCTGCTAGAGGATGTGGTTGGCAGAAACTTGGTGCATATATCAATCTAGCATCATTCTACGTCGTTGGCTTTCCTGTTGGTATTCTTTTAGCCTTCATCATGCACATTGGAGGAAAGGGTCTTTGGTTGGGAATCATATGTGCACTCATAATTCAGGTTCTATCCCTTCTTGCAGTTACTGTGAGAACAAATTGGGAGAAAGAAGCGAAGAAAGCGACAGAGAGAGTTTTTGAATCCAAGATTCCTAGAGATGCAGTTTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_120401.p1 GENE.R_Transcript_120401~~R_Transcript_120401.p1 ORF type:complete len:377 (+),score=33.39,MatE|PF01554.14|2.6e-13,MatE|PF01554.14|3.1e+03,MatE|PF01554.14|6.4e-28,MatE|PF01554.14|7.9e+02 R_Transcript_120401:960-2090(+)
MVGINTQRAMVVLLLVSIPISIVWANTGSILLVLGQDERISKEAGNYILMMMPSLFAYSLLQCFFRFFQTQNVIFPMLLSSGITTLLHIFICWTLVFKSGLGSRGAALANTISYWINLIILVLYVKFSSLFSKTWTGFSNAAFQGIPSFLRLAIPSTFMVCLELWSFEMLVFLSGLLPSPQLETSVLSICVNTTSIVWVIPEGLSGAVSTRISNELGARNPRGASLAIRVALCMTILESILVGLVLLLIRDVWGYAYSSEMEVVRFLAAMMPLLAATNFLDGLTCVLSGAARGCGWQKLGAYINLASFYVVGFPVGILLAFIMHIGGKGLWLGIICALIIQVLSLLAVTVRTNWEKEAKKATERVFESKIPRDAVF*

Click here to download the sequence:
Link to NCBI Protein BLAST