Transcript Information: R_Transcript_120401.p2


Annotated TAIR IDAT5G52450.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21289042-21291749 | Reverse length=486
E-Value1.6E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4738415677723
Replicate 21.0432944306235
Replicate 30.99594511287619
Condition 2: 8 Hour
Replicate 10.91251670610852
Replicate 21.5277621133729
Replicate 30.90194338486395
Condition 3: 24 Hour
Replicate 10.71297537974236
Replicate 20.41096755696728
Replicate 31.7673301921097


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_120401.p2 GENE.R_Transcript_120401~~R_Transcript_120401.p2 ORF type:5prime_partial len:161 (+),score=29.79 R_Transcript_120401:2-484(+)
GAAGTTAATTTTTATGGTTCAAACAGAAAGTACTATCCTTATTTACGCCGCCCGGAAGCCAAGAAAACAACAAAAATGGACAAACAAGATGCAATTGAAGGAGCATCATTAGTTTTGCCTCTAAGCACACCACTAATCCAAGACCAACAGCATCAGATTGAAGAATCAAATGGTGATGAAGTTGATGATTATCATGATGTAAAGCTCATTAACAAATGGGGAATTAATGATTTTGGGGAAGAAGCTAAGAAACAAGTATGGCTAGCAGGTCCATTAATATTAGTTGGGCTCTTAACATATTCATTGCATATAATATCTCTGATGTTTGTTGGTCATCTTGGGGAGTTGACTCTTTCTGGTGCTTCTATGGCCACTTCCTTTGCTTATGTCACTGGTTTCAGCTTCTTGGTTAGTTTCACCTTCACCTCTTTCTTTGTTGGTCTTGCTTCATACATGTATACATTAAACTTTAATTGCACCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_120401.p2 GENE.R_Transcript_120401~~R_Transcript_120401.p2 ORF type:5prime_partial len:161 (+),score=29.79 R_Transcript_120401:2-484(+)
EVNFYGSNRKYYPYLRRPEAKKTTKMDKQDAIEGASLVLPLSTPLIQDQQHQIEESNGDEVDDYHDVKLINKWGINDFGEEAKKQVWLAGPLILVGLLTYSLHIISLMFVGHLGELTLSGASMATSFAYVTGFSFLVSFTFTSFFVGLASYMYTLNFNCT*

Click here to download the sequence:
Link to NCBI Protein BLAST