Transcript Information: R_Transcript_120402.p1


Annotated TAIR IDAT5G52450.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21289042-21291749 | Reverse length=486
E-Value1.3E-84
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.57554381388753
Replicate 20.094577929803144
Replicate 30.61910101611223
Condition 2: 8 Hour
Replicate 10.33089006685466
Replicate 20.60434815786988
Replicate 30.24529203541063
Condition 3: 24 Hour
Replicate 10.62048127642443
Replicate 20.29804403906186
Replicate 30.39437305742157


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_120402.p1 GENE.R_Transcript_120402~~R_Transcript_120402.p1 ORF type:complete len:222 (+),score=4.54,MatE|PF01554.14|9.1e-14,MatE|PF01554.14|1.2e+03,MatE|PF01554.14|17 R_Transcript_120402:960-1625(+)
ATGGTAGGCATAAACACGCAAAGGGCCATGGTTGTGCTTTTGCTGGTAAGCATACCGATATCTATAGTCTGGGCAAACACCGGATCCATACTACTTGTTCTAGGACAAGACGAGAGGATATCAAAAGAAGCCGGAAACTATATCCTCATGATGATGCCTAGTCTCTTTGCCTATAGCCTTCTTCAATGCTTTTTTCGATTCTTTCAAACCCAAAACGTCATCTTTCCAATGCTGCTCAGCTCTGGAATCACTACCTTATTGCACATATTCATATGTTGGACTTTGGTATTTAAATCTGGTCTCGGAAGCAGAGGAGCTGCCCTAGCCAACACTATTTCATACTGGATTAATCTAATCATATTGGTCCTTTATGTGAAATTTTCTTCCTTGTTCTCAAAGACTTGGACCGGCTTCTCAAATGCAGCGTTTCAAGGTATCCCATCATTTCTGAGGCTTGCTATTCCCTCGACTTTCATGGTCTGCTTGGAACTTTGGTCCTTCGAGATGCTAGTTTTCTTGTCTGGTCTTCTACCCAGTCCACAATTAGAAACTTCAGTTCTATCTATCTGGTATGTGCTTGACCTTCTTTCATTCTGTTTCAATGGAAGGAACATGATTGAGAGCATGTATGCTCTTTTATTGTTTCAGCTATCATGTCTGATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_120402.p1 GENE.R_Transcript_120402~~R_Transcript_120402.p1 ORF type:complete len:222 (+),score=4.54,MatE|PF01554.14|9.1e-14,MatE|PF01554.14|1.2e+03,MatE|PF01554.14|17 R_Transcript_120402:960-1625(+)
MVGINTQRAMVVLLLVSIPISIVWANTGSILLVLGQDERISKEAGNYILMMMPSLFAYSLLQCFFRFFQTQNVIFPMLLSSGITTLLHIFICWTLVFKSGLGSRGAALANTISYWINLIILVLYVKFSSLFSKTWTGFSNAAFQGIPSFLRLAIPSTFMVCLELWSFEMLVFLSGLLPSPQLETSVLSIWYVLDLLSFCFNGRNMIESMYALLLFQLSCLI*

Click here to download the sequence:
Link to NCBI Protein BLAST