Transcript Information: R_Transcript_120404.p1


Annotated TAIR IDAT5G52450.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21289042-21291749 | Reverse length=486
E-Value1.3E-82
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.70203695979687
Replicate 21.5141562800215
Replicate 30.99115691521813
Condition 2: 8 Hour
Replicate 11.1772050455406
Replicate 21.3975551150741
Replicate 30.52360415251116
Condition 3: 24 Hour
Replicate 10
Replicate 21.908628173223
Replicate 31.4732108923873


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_120404.p1 GENE.R_Transcript_120404~~R_Transcript_120404.p1 ORF type:complete len:208 (+),score=34.57,MatE|PF01554.14|9e-23,MatE|PF01554.14|1.3e+02 R_Transcript_120404:1902-2525(+)
ATGAAATTTCAGGTAACCAATTTTTCTGTGTTAATTTCTTCCAGTGTTAACACTACTTCAATTGTTTGGGTTATTCCTGAAGGTCTCAGTGGAGCTGTCAGCACTCGCATATCCAACGAGTTGGGAGCTAGGAATCCACGAGGGGCAAGCTTAGCAATACGGGTTGCATTATGCATGACAATCTTGGAGAGCATTCTTGTTGGCTTAGTCTTGTTACTCATACGAGATGTTTGGGGCTATGCTTACAGCAGTGAGATGGAAGTGGTCAGATTTTTAGCTGCTATGATGCCCTTATTAGCTGCAACCAATTTCCTGGATGGCCTAACATGTGTCCTCTCTGGTGCTGCTAGAGGATGTGGTTGGCAGAAACTTGGTGCATATATCAATCTAGCATCATTCTACGTCGTTGGCTTTCCTGTTGGTATTCTTTTAGCCTTCATCATGCACATTGGAGGAAAGGGTCTTTGGTTGGGAATCATATGTGCACTCATAATTCAGGTTCTATCCCTTCTTGCAGTTACTGTGAAAACAAATTGGGAGAAGGAAGTAAAGCATTCAAACAACTTTCTCCTCTCTGTTCTTTTCATTTCTTCTAATTTCTCTACAGTTTCCCTTCATCAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_120404.p1 GENE.R_Transcript_120404~~R_Transcript_120404.p1 ORF type:complete len:208 (+),score=34.57,MatE|PF01554.14|9e-23,MatE|PF01554.14|1.3e+02 R_Transcript_120404:1902-2525(+)
MKFQVTNFSVLISSSVNTTSIVWVIPEGLSGAVSTRISNELGARNPRGASLAIRVALCMTILESILVGLVLLLIRDVWGYAYSSEMEVVRFLAAMMPLLAATNFLDGLTCVLSGAARGCGWQKLGAYINLASFYVVGFPVGILLAFIMHIGGKGLWLGIICALIIQVLSLLAVTVKTNWEKEVKHSNNFLLSVLFISSNFSTVSLHQ*

Click here to download the sequence:
Link to NCBI Protein BLAST