Transcript Information: R_Transcript_120406.p1


Annotated TAIR IDAT5G52450.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21289042-21291749 | Reverse length=486
E-Value1.7E-67
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.62581580416179
Replicate 20.47991543808681
Replicate 30.39268693021976
Condition 2: 8 Hour
Replicate 12.3786268805895
Replicate 20.76665880598351
Replicate 31.0372348925935
Condition 3: 24 Hour
Replicate 11.8366245782163
Replicate 20.75618030481979
Replicate 31.3757985803193


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_120406.p1 GENE.R_Transcript_120406~~R_Transcript_120406.p1 ORF type:complete len:175 (+),score=22.56,MatE|PF01554.14|5.3e-23 R_Transcript_120406:1899-2423(+)
ATGAAATTTCAGGTAACCAATTTTTCTGTGTTAATTTCTTCCAGTGTTAACACTACTTCAATTGTTTGGGTTATTCCTGAAGGTCTCAGTGGAGCTGTCAGCACTCGCATATCCAACGAGTTGGGAGCTAGGAATCCACGAGGGGCAAGCTTAGCAATACGGGTTGCATTATGCATGACAATCTTGGAGAGCATTCTTGTTGGCTTAGTCTTGTTACTCATACGAGATGTTTGGGGCTATGCTTACAGCAGTGAGATGGAAGTGGTCAGATTTTTAGCTGCTATGATGCCCTTATTAGCTGCAACCAATTTCCTGGATGGCCTAACATGTGTCCTCTCTGGTGCTGCTAGAGGATGTGGTTGGCAGAAACTTGGTGCATATATCAATCTAGCATCATTCTACGTCGTTGGCTTTCCTGTTGGTATTCTTTTAGCCTTCATCATGCACATTGGAGGAAAGGTAACAGCGCGGTCAGTCATTACACATTTTGTCTTACAGTCTTTTGGCCATTATGATGTTCAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_120406.p1 GENE.R_Transcript_120406~~R_Transcript_120406.p1 ORF type:complete len:175 (+),score=22.56,MatE|PF01554.14|5.3e-23 R_Transcript_120406:1899-2423(+)
MKFQVTNFSVLISSSVNTTSIVWVIPEGLSGAVSTRISNELGARNPRGASLAIRVALCMTILESILVGLVLLLIRDVWGYAYSSEMEVVRFLAAMMPLLAATNFLDGLTCVLSGAARGCGWQKLGAYINLASFYVVGFPVGILLAFIMHIGGKVTARSVITHFVLQSFGHYDVQ*

Click here to download the sequence:
Link to NCBI Protein BLAST