Transcript Information: R_Transcript_120512.p1


Annotated TAIR IDAT4G23650.1
Annotated Gene Namecalcium-dependent protein kinase 6
Annotated Gene Symbol(s)CDPK6, CPK3
Annotation TypeOrtholog
Chromosome Positionchr4:12324967-12327415 | Reverse length=529
E-Value1.1E-219
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0288725381574
Replicate 20.21916806280061
Replicate 31.1477279797655
Condition 2: 8 Hour
Replicate 10.35783101175515
Replicate 20.65355395777995
Replicate 30.90947527116761
Condition 3: 24 Hour
Replicate 11.6295729556199
Replicate 20.36835505453991
Replicate 30.77680789076671


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_120512.p1 GENE.R_Transcript_120512~~R_Transcript_120512.p1 ORF type:complete len:479 (+),score=74.78,Pkinase|PF00069.21|5.2e-72,Pkinase|PF00069.21|2.9e+02,Pkinase_Tyr|PF07714.13|1e-26,EF-hand_1|PF00036.28|5.3e-08,EF-hand_1|PF00036.28|2.7e+03,EF-hand_6|PF13405.2|2.6e-06,EF-hand_7|PF13499.2|7.4e-06,Kinase-like|PF14531.2|5.8,Kinase-like|PF14531.2|0.0014,EF-hand_5|PF13202.2|1.5e-05 R_Transcript_120512:105-1439(+)
ATGGGCAACTGTAATGGCCAACCTTCCCGACCCTACACAACTGATGACACCACCACCACAACCACCAACTATTCTCCCTCCAAACCCTCACCCCAGCCCAAACCACAACCAGCCCACCGGCCCACCACCACCACAACAGGCTCATCATCATCCTCCGGCAAGATCGGCCGCATATTGGGCCGCCCAATGGAAGACGTCCGATCCAACTACATTTTCGGGCGCGAGCTAGGCCGAGGCCAATTCGGGGTTACCTACTTAGTAACCCACAAAGACACCAAACAACAGCTGGCTTGCAAATCAATAGCCACTCGGAAACTTATCAACCAAGATGACATGGATGACGTACGCCGTGAGGTCCAGATCATGCACCACCTGACGGGTCACCGTAATATTGTCGAATTAAAGGGCGCTTATGAGGACCGCCATTCAGTTAATCTAGTTATGAAGCTTTGTGCTGGCGGTGAGCTCTTTGATCGGATTATTGCTAAGGGTCATTACTCTGAACGTGAAGCTGCTAAATTGTTTCGCCAAATCGTTACTGTTGTTTATAATTGTCATTCTATGGGAGTTATTCATCGAGATCTTAAGCCTGAGAATTTCCTCTTTCTCAGTCCTGATGAAGACTCTCCTCTTAAAGCTACTGATTTTGACCTTTCTGTCTTCTTCAAACCAGGAGAAGTCTTCAGAGACCTTGTTGGTAGTGCATATTATGTTGCTCCTGAGGTATTGCGTCGTAATTATAGTGCTGAAGCAGATATTTGGAGTGCTGGGGTGATACTATACATCCTCCTTAGTGGTGTTCCACCATTCTGGGGAGAGAATGAGCAGGGTATTTTTGATTCTATTGTACGGGGAGACCTTGATTTCTCATCTGAACCATGGCCCTCAATTTCCCGCAGCGCTAAAGATCTTGTGAAGAAAATGTTACGACAGGATCCCAAGGAAAGGCTTTCTGCTCTTGATGCTTTAAATCATCCATGGATGAGAGAAGATGGAGTTGCTTCTGATAAGCCAATTGATATTGCTGTTTTGACTAGAATGAAGCAGTTCAGGGCAATGAACAAACTGAAAAAAGTCGCTCTGAGGGTAATTGCAGAGAACCTCTCTGAAGAAGAAATTATGGGTCTCAAGGAAATGTTCAAATCTATGGATACAGACAACAGTGGGACCATTACTTTTGAAGAGTTAAAGGCTGGTCTCCCAAAACTGGGAACTAAACTTTCTGAGAGTGAAGTGAGGCAATACATGGAAGCGGTTTGCCCTTTTAATTCTATTGTTTTTCCCATGTTTTTAAGAGTATTTTCTCAACATGTTTGTCCAACTATATCAGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_120512.p1 GENE.R_Transcript_120512~~R_Transcript_120512.p1 ORF type:complete len:479 (+),score=74.78,Pkinase|PF00069.21|5.2e-72,Pkinase|PF00069.21|2.9e+02,Pkinase_Tyr|PF07714.13|1e-26,EF-hand_1|PF00036.28|5.3e-08,EF-hand_1|PF00036.28|2.7e+03,EF-hand_6|PF13405.2|2.6e-06,EF-hand_7|PF13499.2|7.4e-06,Kinase-like|PF14531.2|5.8,Kinase-like|PF14531.2|0.0014,EF-hand_5|PF13202.2|1.5e-05 R_Transcript_120512:105-1439(+)
MGNCNGQPSRPYTTDDTTTTTTNYSPSKPSPQPKPQPAHRPTTTTTGSSSSSGKIGRILGRPMEDVRSNYIFGRELGRGQFGVTYLVTHKDTKQQLACKSIATRKLINQDDMDDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLVMKLCAGGELFDRIIAKGHYSEREAAKLFRQIVTVVYNCHSMGVIHRDLKPENFLFLSPDEDSPLKATDFDLSVFFKPGEVFRDLVGSAYYVAPEVLRRNYSAEADIWSAGVILYILLSGVPPFWGENEQGIFDSIVRGDLDFSSEPWPSISRSAKDLVKKMLRQDPKERLSALDALNHPWMREDGVASDKPIDIAVLTRMKQFRAMNKLKKVALRVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTKLSESEVRQYMEAVCPFNSIVFPMFLRVFSQHVCPTISV*

Click here to download the sequence:
Link to NCBI Protein BLAST