Transcript Information: R_Transcript_120513.p1


Annotated TAIR IDAT4G23650.1
Annotated Gene Namecalcium-dependent protein kinase 6
Annotated Gene Symbol(s)CDPK6, CPK3
Annotation TypeOrtholog
Chromosome Positionchr4:12324967-12327415 | Reverse length=529
E-Value8.2E-103
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1209426461469
Replicate 21.0350288937612
Replicate 33.3876161233747
Condition 2: 8 Hour
Replicate 13.7073668758153
Replicate 25.0390719642108
Replicate 33.5791908265552
Condition 3: 24 Hour
Replicate 16.0628012044993
Replicate 23.1063744916306
Replicate 31.3872488886062


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_120513.p1 GENE.R_Transcript_120513~~R_Transcript_120513.p1 ORF type:5prime_partial len:284 (+),score=24.33,Pkinase|PF00069.21|3.1e-40,Pkinase_Tyr|PF07714.13|4.5e-18 R_Transcript_120513:1-852(+)
CAACAGTCCAACCCAAACCTCCTCAGACATCTCTACCCAAAACGCGTTTACTCTTCAGACCTCCTTTCTCTCTCCTCAATGGGCAACTGTAATGGCCAACCTTCCCGACCCTACACAACTGATGACACCACCACCACAACCACCAACTATTCTCCCTCCAAACCCTCACCCCAGCCCAAACCACAACCAGCCCACCGGCCCACCACCACCACAACAGGCTCATCATCATCCTCCGGCAAGATCGGCCGCATATTGGGCCGCCCAATGGAAGATGTCCGGTCCAACTACATTTTCGGGCGCGAGCTAGGCCGAGGCCAATTCGGGGTTACCTACTTAGTAACCCACAAAGACACCAAACAACAGCTGGCTTGCAAATCAATAGCCACTCGGAAACTTATCAACCAAGATGACATGGATGACGTACGCCGTGAGGTCCAGATCATGCACCACCTGACGGGTCACCGTAATATTGTCGAATTAAAGGGCGCTTATGAGGACCGCCATTCAGTTAATCTAGTTATGAAGCTTTGTGCTGGCGGTGAGCTCTTTGATCGGATTATTGCTAAGGGTCATTACTCTGAACGTGAAGCTGCTAAATTGTTTCGCCAAATCGTTACTGTTGTTTATAATTGTCATTCTATGGGAGTTATTCATCGAGATCTTAAGCCTGAGAATTTCCTCTTTCTCAGTCCTGATGAAGACTCTCCTCTTAAAGCTACTGATTTTGACCTTTCTGTCTTCTTCAAACCAGGAGAAGTCTTCAGAACCTTGTTGGTAGTGCATATTATGTTGCTCCTGAGGTATTGCGTCGTAATTATAGTGCTGAAGCAGATATTTGGAGTGCTGGGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_120513.p1 GENE.R_Transcript_120513~~R_Transcript_120513.p1 ORF type:5prime_partial len:284 (+),score=24.33,Pkinase|PF00069.21|3.1e-40,Pkinase_Tyr|PF07714.13|4.5e-18 R_Transcript_120513:1-852(+)
QQSNPNLLRHLYPKRVYSSDLLSLSSMGNCNGQPSRPYTTDDTTTTTTNYSPSKPSPQPKPQPAHRPTTTTTGSSSSSGKIGRILGRPMEDVRSNYIFGRELGRGQFGVTYLVTHKDTKQQLACKSIATRKLINQDDMDDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLVMKLCAGGELFDRIIAKGHYSEREAAKLFRQIVTVVYNCHSMGVIHRDLKPENFLFLSPDEDSPLKATDFDLSVFFKPGEVFRTLLVVHIMLLLRYCVVIIVLKQIFGVLG*

Click here to download the sequence:
Link to NCBI Protein BLAST