Transcript Information: R_Transcript_120514.p1


Annotated TAIR IDAT4G23650.1
Annotated Gene Namecalcium-dependent protein kinase 6
Annotated Gene Symbol(s)CDPK6, CPK3
Annotation TypeOrtholog
Chromosome Positionchr4:12324967-12327415 | Reverse length=529
E-Value1.1E-219
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.2092720028074
Replicate 22.5950483660593
Replicate 32.3164116670266
Condition 2: 8 Hour
Replicate 11.8708301308008
Replicate 22.3114619431338
Replicate 36.8119527496733
Condition 3: 24 Hour
Replicate 14.1788368212225
Replicate 23.4693665670571
Replicate 38.3615950489271


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_120514.p1 GENE.R_Transcript_120514~~R_Transcript_120514.p1 ORF type:internal len:445 (+),score=77.41,Pkinase|PF00069.21|4.3e-72,Pkinase|PF00069.21|9.2e+02,Pkinase_Tyr|PF07714.13|8.2e-27,EF-hand_1|PF00036.28|4.8e-08,EF-hand_1|PF00036.28|3.4e+03,EF-hand_6|PF13405.2|2.4e-06,EF-hand_6|PF13405.2|8.5e+03,EF-hand_7|PF13499.2|7.9e-06,Kinase-like|PF14531.2|5.2,Kinase-like|PF14531.2|0.0012,EF-hand_5|PF13202.2|1.4e-05 R_Transcript_120514:1-1332(+)
CAACAGTCCAACCCAAACCTCCTCAGACATCTCTACCCAAAACGCGTTTACTCTTCAGACCTCCTTTCTCTCTCCTCAATGGGCAACTGTAATGGCCAACCTTCCCGACCCTACACAACTGATGACACCACCACCACAACCACCAACTATTCTCCCTCCAAACCCTCACCCCAGCCCAAACCACAACCAGCCCACCGGCCCACCACCACCACAACAGGCTCATCATCATCCTCCGGCAAGATCGGCCGCATATTGGGCCGCCCAATGGAAGATGTCCGGTCCAACTACATTTTCGGGCGCGAGCTAGGCCGAGGCCAATTCGGGGTTACCTACTTAGTAACCCACAAAGACACCAAACAACAGCTGGCTTGCAAATCAATAGCCACTCGGAAACTTATCAACCAAGATGACATGGATGACGTACGCCGTGAGGTCCAGATCATGCACCACCTGACGGGTCACCGTAATATTGTCGAATTAAAGGGCGCTTATGAGGACCGCCATTCAGTTAATCTAGTTATGAAGCTTTGTGCTGGCGGTGAGCTCTTTGATCGGATTATTGCTAAGGGTCATTACTCTGAACGTGAAGCTGCTAAATTGTTTCGCCAAATCGTTACTGTTGTTTATAATTGTCATTCTATGGGAGTTATTCATCGAGATCTTAAGCCTGAGAATTTCCTCTTTCTCAGTCCTGATGAAGACTCTCCTCTTAAAGCTACTGATTTTGACCTTTCTGTCTTCTTCAAACCAGGAGAAGTCTTCAGAGACCTTGTTGGTAGTGCATATTATGTTGCTCCTGAGGTATTGCGTCGTAATTATAGTGCTGAAGCAGATATTTGGAGTGCTGGGGTGATACTATACATCCTCCTTAGTGGTGTTCCACCATTCTGGGGAGAGAATGAGCAGGGTATTTTTGATTCTATTGTACGGGGAGACCTTGATTTCTCATCTGAACCATGGCCCTCAATTTCCCGCAGCGCTAAAGATCTTGTGAAGAAAATGTTACGACAGGATCCCAAGGAAAGGCTTTCTGCTCTTGATGCTTTAAATCATCCATGGATGAGAGAAGATGGAGTTGCTTCTGATAAGCCAATTGATATTGCTGTTTTGACTAGAATGAAGCAGTTCAGGGCAATGAACAAACTGAAAAAAGTCGCTCTGAGGGTAATTGCAGAGAACCTCTCTGAAGAAGAAATTATGGGTCTCAAGGAAATGTTCAAATCTATGGATACAGACAACAGTGGGACCATTACTTTTGAAGAGTTAAAGGCTGGTCTCCCAAAACTGGGAACTAAACTTTCTGAGAGTGAAGTGAGGCAATACATGGAAGCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_120514.p1 GENE.R_Transcript_120514~~R_Transcript_120514.p1 ORF type:internal len:445 (+),score=77.41,Pkinase|PF00069.21|4.3e-72,Pkinase|PF00069.21|9.2e+02,Pkinase_Tyr|PF07714.13|8.2e-27,EF-hand_1|PF00036.28|4.8e-08,EF-hand_1|PF00036.28|3.4e+03,EF-hand_6|PF13405.2|2.4e-06,EF-hand_6|PF13405.2|8.5e+03,EF-hand_7|PF13499.2|7.9e-06,Kinase-like|PF14531.2|5.2,Kinase-like|PF14531.2|0.0012,EF-hand_5|PF13202.2|1.4e-05 R_Transcript_120514:1-1332(+)
QQSNPNLLRHLYPKRVYSSDLLSLSSMGNCNGQPSRPYTTDDTTTTTTNYSPSKPSPQPKPQPAHRPTTTTTGSSSSSGKIGRILGRPMEDVRSNYIFGRELGRGQFGVTYLVTHKDTKQQLACKSIATRKLINQDDMDDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLVMKLCAGGELFDRIIAKGHYSEREAAKLFRQIVTVVYNCHSMGVIHRDLKPENFLFLSPDEDSPLKATDFDLSVFFKPGEVFRDLVGSAYYVAPEVLRRNYSAEADIWSAGVILYILLSGVPPFWGENEQGIFDSIVRGDLDFSSEPWPSISRSAKDLVKKMLRQDPKERLSALDALNHPWMREDGVASDKPIDIAVLTRMKQFRAMNKLKKVALRVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTKLSESEVRQYMEA

Click here to download the sequence:
Link to NCBI Protein BLAST