Transcript Information: R_Transcript_120518.p2


Annotated TAIR IDAT4G23650.1
Annotated Gene Namecalcium-dependent protein kinase 6
Annotated Gene Symbol(s)CDPK6, CPK3
Annotation TypeOrtholog
Chromosome Positionchr4:12324967-12327415 | Reverse length=529
E-Value9.5E-50
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 135.871036311013
Replicate 238.888799901491
Replicate 336.451591131269
Condition 2: 8 Hour
Replicate 125.976308900556
Replicate 239.666259961755
Replicate 335.671860871369
Condition 3: 24 Hour
Replicate 135.734326032687
Replicate 236.439123384432
Replicate 333.87836029798


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_120518.p2 GENE.R_Transcript_120518~~R_Transcript_120518.p2 ORF type:complete len:115 (+),score=18.35,EF-hand_1|PF00036.28|6.2e-07,EF-hand_1|PF00036.28|3.5e-09,EF-hand_6|PF13405.2|3.1e-08,EF-hand_6|PF13405.2|6.3e-05,EF-hand_7|PF13499.2|9.5e-14,EF-hand_8|PF13833.2|1.1,EF-hand_8|PF13833.2|2.3e-11,EF-hand_5|PF13202.2|8e-05,EF-hand_5|PF13202.2|0.00065 R_Transcript_120518:3045-3389(+)
ATGGAGTTTATCACAGCCACAATGCATATGAATAGGTTGGAAAGGGAAGACCATTTGTACAAGGCTTTTGAATATTTCGATGAGGACAAGAGCGGGTACATAACAATGCAAGAGTTAGAACAAGCCTTGAAGAAATATAACATGGGTGATGAGAAAACAATACGGGAGATACTTGCAGAAGTTGACTCTGATAATGATGGTAGAATCAACTACGAAGAATTCGTAGCTATGATGAAGAAAGGCAACCCTGATTTGGGTCAAAAGAGGAGGAGAAGATACTTGATAATGGCTTCCTTAATTAGTTCGACAATGATCATTTTGAGCTCACGAACTAGGTGTGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_120518.p2 GENE.R_Transcript_120518~~R_Transcript_120518.p2 ORF type:complete len:115 (+),score=18.35,EF-hand_1|PF00036.28|6.2e-07,EF-hand_1|PF00036.28|3.5e-09,EF-hand_6|PF13405.2|3.1e-08,EF-hand_6|PF13405.2|6.3e-05,EF-hand_7|PF13499.2|9.5e-14,EF-hand_8|PF13833.2|1.1,EF-hand_8|PF13833.2|2.3e-11,EF-hand_5|PF13202.2|8e-05,EF-hand_5|PF13202.2|0.00065 R_Transcript_120518:3045-3389(+)
MEFITATMHMNRLEREDHLYKAFEYFDEDKSGYITMQELEQALKKYNMGDEKTIREILAEVDSDNDGRINYEEFVAMMKKGNPDLGQKRRRRYLIMASLISSTMIILSSRTRCE*

Click here to download the sequence:
Link to NCBI Protein BLAST