Transcript Information: R_Transcript_120623.p1


Annotated TAIR IDAT1G06660.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30820.2); Has 166 Blast hits to 144 proteins in 35 species: Archae - 0; Bacteria - 17; Metazoa - 13; Fungi - 20; Plants - 104; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:2037461-2040148 | Reverse length=481
E-Value5.7E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.6840360867764
Replicate 23.5914724396299
Replicate 34.2698962624407
Condition 2: 8 Hour
Replicate 13.1681272629111
Replicate 22.9422212948928
Replicate 34.6971273096615
Condition 3: 24 Hour
Replicate 16.8974113820076
Replicate 24.6915791938289
Replicate 37.6318970289839


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_120623.p1 GENE.R_Transcript_120623~~R_Transcript_120623.p1 ORF type:3prime_partial len:456 (+),score=104.57 R_Transcript_120623:342-1706(+)
ATGCCAGTAACTTACTGCGACGTCTTCGCATTTCTTTGGCGATCTCTCCAAACAATGGGCTGCTTCTTCGACTGCTTCAGCGTTCGCCACCGCAACCACAATCATTCTCGCCGTCATCCTCCTCGTCCTACTTCTTCTTCATCACCTTCCACCTCCAGATTACAAGTACAAGAGGAGGTGGAGCCAAAGATTCGCCTCTTGTCTCTTTTTACAAATGAAGATGAGGAAAATTGTGTTGCGAAAGACCAGGAGGCACTTGTGCAGCGGTTGGGGCAGCCTGAGATTGATCAAGAGCTTCTAGAAGAAGCCAAATTCCTTAAAGCATGTGGCACTCTACCTGAGACACCAGCTGAAATCCGAAAAGCAGTTACTTTTGCTGAAAATGTGGAGTTAGATATACAAAGACCTCATAGCATGCTAAAGTCTTCTCCAGAGACTTCTTATGGCACCCAACCACCAACAGCAGTGCCTAAGAATGCAGAGGGATCTGATTTTCATGGAGAATTTGTCATTCATGAATCATCATCACAGACTCCAGAGCAGCTCCAAAATGTGGAGACTTCTGCTATAAATTTTCAGAAACCGGATACACAAAGATCTCACAGCAAGGCAGTGTCCTCTCCAGAAACTCCTGGTGAAACCCAACAACCGGAAGCACTTCCTGAAAATTTAGACAGTTTGGCTTCACATGCTGCTCATAGTGTGCTAGAATTGTCACCAGAGACTCCTGAAGATATCCGGAAAGAAATGTCACTGGAGACTCCAGAAGATATGTGGAAAGAAGACACCCGTACTGAAAATCTAGAGAAATCAGAGCTTACAAGAAGTCGTAGTGTGGTAAAATATTCACCTTATCCTACACCGGCAAAAATAACTGATGATATGCAAACACCTGGAACTGTATTTGCGACAAATATGAAGAATTTGTCAAGAGGGAATGCTCGTATTCGTTCTCAGTATGTTTACACAGTTTTAAATCCAATCGAGAATTTCTGTGAGCACCAGGAATCAAAGGAAGAGAAGTCCGTTTTACATGGACTATCAGATCGTGAAGGAGAAAGTGTGACTCCTCTCTCTAAAGTGGGTTCAAGCGAAGAGTCAGCTAAAAGGGAGAACATTGGTGACGTTAGTTTATCTTCCTGGCTGAAACCTCCACTATCCGCTAAAAATGGGGCTGCCAACTACAAGAAGCCTAACATTGGAAGAACACCTGGTGATAGGCCTATTATTGGGTTGGTTGCTACACATTGGAATGAGCAAGAGGAAGCTTCTCAGACCTCACCAAAATGGTGGGATGGTAATGGGATTCCAAATTCAACAACAAAATACAAGGAGGATCAGAAAGTCCGTTGGCATGCTACTCCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_120623.p1 GENE.R_Transcript_120623~~R_Transcript_120623.p1 ORF type:3prime_partial len:456 (+),score=104.57 R_Transcript_120623:342-1706(+)
MPVTYCDVFAFLWRSLQTMGCFFDCFSVRHRNHNHSRRHPPRPTSSSSPSTSRLQVQEEVEPKIRLLSLFTNEDEENCVAKDQEALVQRLGQPEIDQELLEEAKFLKACGTLPETPAEIRKAVTFAENVELDIQRPHSMLKSSPETSYGTQPPTAVPKNAEGSDFHGEFVIHESSSQTPEQLQNVETSAINFQKPDTQRSHSKAVSSPETPGETQQPEALPENLDSLASHAAHSVLELSPETPEDIRKEMSLETPEDMWKEDTRTENLEKSELTRSRSVVKYSPYPTPAKITDDMQTPGTVFATNMKNLSRGNARIRSQYVYTVLNPIENFCEHQESKEEKSVLHGLSDREGESVTPLSKVGSSEESAKRENIGDVSLSSWLKPPLSAKNGAANYKKPNIGRTPGDRPIIGLVATHWNEQEEASQTSPKWWDGNGIPNSTTKYKEDQKVRWHATP

Click here to download the sequence:
Link to NCBI Protein BLAST