Transcript Information: R_Transcript_12078.p1


Annotated TAIR IDAT5G44635.1
Annotated Gene Nameminichromosome maintenance (MCM2/3/5) family protein
Annotated Gene Symbol(s)MCM6
Annotation TypeOrtholog
Chromosome Positionchr5:18006431-18010542 | Reverse length=831
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3818463261326
Replicate 20.89519110302046
Replicate 31.3613823377558
Condition 2: 8 Hour
Replicate 10.7276161418432
Replicate 20.66447064902748
Replicate 31.8526837713315
Condition 3: 24 Hour
Replicate 13.3813824598944
Replicate 22.0516519898211
Replicate 32.8844261990485


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_12078.p1 GENE.R_Transcript_12078~~R_Transcript_12078.p1 ORF type:3prime_partial len:774 (+),score=162.90,MCM|PF00493.19|4e-133,MCM|PF00493.19|3.7e+03,MCM_N|PF14551.2|1.3e-18,Mg_chelatase|PF01078.17|3.5e+02,Mg_chelatase|PF01078.17|4.6e-06 R_Transcript_12078:77-2395(+)
ATGGACTCTTACGGGGCTTTCTTCGTTGATGAGAAGGCAGTCACAGTAGAGAACATCTTCTTGGACTTCCTCAAAAGTTTTCGATTGGATTCGAGCTCGCGAGGCCCTTACTATGCGACCGAGATTGCTGCTATGGAGGCGAATGAATCGACCACTATGTTCATTGATTTCTCTCACGTCATGCGGTTCAATGACATCCTTCAGAGGGCCATTTCCGATGAGTATCTGAGATTTGAGCCTTTTCTGAAGAACGCTTGCAAAAGGTTTGTCATGGAGCAGAAGCCCAAGTTCATTGCCGATGATAACCCTAACAAGGATATTAATGTCGCTTTCTTTAACATTCCTTTGGTCAAGAGACTGAGAGAGTTAACCACATCTGAAATCGGGAGACTAGTATCTGTCACAGGAGTGGTTACTCGATCTAGTGAGGTTAGACCAGAGCTGCTCCAAGGTACTTTTAAGTGCTTGGATTGTGGTACTGTCATTAAGAATGTCGAACAGCAATTCAAATACACAGAGCCTGCTATTTGTGTCAATGCAACCTGTGCGAACAGAACAAAATGGGCTTTGCTTCGACAAGAAAGCAAATTTGCTGATTGGCAAAGGGTGAGGATGCAGGAAACTTCTAAAGAAATACCAGCAGGGTCTCTGCCTAGGTCACTAGATGTCATTTTACGTCATGAGATTGTCGAACAGGCTAGAGCTGGTGACACGGTCATCTTCACTGGTACTGTTGTCGTTATACCAGACATCTTGGCATTGACATCTCCTGGCGAGAGAGCCGAATGCCTTAGAGATGCTTCTTCTCAAAGGAAAAATGCTGGTGCTGGAAATGAAGGAGTAAGGGGTCTGAAATCATTGGGAGTGAGAGACCTTTCTTATCGTCTGGCATTTATTGCTAACTCAGTGCAGATTGCTGATGGAAGAAGAGATACAGACATCAGGAATAGAAAGAAGGATGCAGATGAAGATGAGAATCAGCAGTTCACGGCAGAGGAGCTGGATGAGATCCAAAGAATGAGAGTCACGCCTGACTTCTTCAATAAACTGGTTGATAGTATTGCTCCAACTGTATTTGGTCATCAAGATATCAAGCGAGCGATTCTTCTTATGCTACTAGGTGGAGTTCACAAGCATACCCAAGAGGGCATCAACTTGAGAGGTGACATTAATGTCTGCATTGTGGGAGATCCTAGCTGTGCAAAGTCTCAGTTTCTCAAATACACTTCTGGCCTTGTCCCAAGATCTGTCTACACATCAGGGAAATCATCCTCAGCTGCCGGGTTGACTGCAACTGTGGCTAAAGAGCCAGAAACTGGAGAGTTTTGTATTGAGGCTGGGGCACTGATGCTTGCAGATAATGGCATTTGTTGTATTGATGAGTTTGACAAGATGGATATCAGAGACCAGGTTGCGATTCATGAAGCCATGGAACAACAGACCATAAGTATCACAAAGGCAGGGATACAGGCAACACTAAATGCTAGAACATCAATTTTAGCTGCTGCTAATCCTACAGGAGGACGTTATGATAAGACCAAACCATTGAAGTACAACGTTGCTCTACCTCCAGCAATCCTTTCAAGGTTTGATCTGGTGTATGTGATGATCGATGATCCAGATGATCAGATTGATTACTACATTGCTCAACATATTGTAAGAGTGCATCAGAAACACGAAAACGCACTGTCTCCTTCCTTTACTACTGCACAGCTGAAACGCTATATTGCTTATGCAAAAACGTTGAGACCAAAGCTGACTTCAGAAGCTAGGAAATTGTTGGTTGATTCATATGTCATGCTTCGTAGAGGCGATGCAGCACCAGGGAGTAGAGTTGCTTACAGAATGACTGTAAGACAGCTGGAGGCATTGATACGGCTCTCAGAAGCCATTGCACGAAGTCATTTAGAACTGCAGGTGCTACCACGGCATGTCAATGTTGCAGTTAAACTGCTGAAGACATCAGTTATTAGCGTGGAATCCAGTGAAATTGATCTGTCTGAGTTTGATGAAGAAAGTAATAATGATGCTGGAGGTGGTGATGCATCTGGACAAGACGATGCTCAGCCTATTACAGCTCCAGGTGAACCAGCTCCAGCTACTTCAGGGAAAGGTCTACCTGGGATAAGACAAAAAGATTTGATACAGTGGTACGTGGCCCAACAAAATGAGAAAAACAGCTACAGTTCAATGGAAGAGGTTGTTAGTGAAGTTAGAACAATAAAGGCCATAATTCAGAGATTGATTGACATCGAAGGTCATTTGATAGTTGTCGATGATGGTATGCAAGTAGCATCTGGAAGTGAAGAAGCTGCCCGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_12078.p1 GENE.R_Transcript_12078~~R_Transcript_12078.p1 ORF type:3prime_partial len:774 (+),score=162.90,MCM|PF00493.19|4e-133,MCM|PF00493.19|3.7e+03,MCM_N|PF14551.2|1.3e-18,Mg_chelatase|PF01078.17|3.5e+02,Mg_chelatase|PF01078.17|4.6e-06 R_Transcript_12078:77-2395(+)
MDSYGAFFVDEKAVTVENIFLDFLKSFRLDSSSRGPYYATEIAAMEANESTTMFIDFSHVMRFNDILQRAISDEYLRFEPFLKNACKRFVMEQKPKFIADDNPNKDINVAFFNIPLVKRLRELTTSEIGRLVSVTGVVTRSSEVRPELLQGTFKCLDCGTVIKNVEQQFKYTEPAICVNATCANRTKWALLRQESKFADWQRVRMQETSKEIPAGSLPRSLDVILRHEIVEQARAGDTVIFTGTVVVIPDILALTSPGERAECLRDASSQRKNAGAGNEGVRGLKSLGVRDLSYRLAFIANSVQIADGRRDTDIRNRKKDADEDENQQFTAEELDEIQRMRVTPDFFNKLVDSIAPTVFGHQDIKRAILLMLLGGVHKHTQEGINLRGDINVCIVGDPSCAKSQFLKYTSGLVPRSVYTSGKSSSAAGLTATVAKEPETGEFCIEAGALMLADNGICCIDEFDKMDIRDQVAIHEAMEQQTISITKAGIQATLNARTSILAAANPTGGRYDKTKPLKYNVALPPAILSRFDLVYVMIDDPDDQIDYYIAQHIVRVHQKHENALSPSFTTAQLKRYIAYAKTLRPKLTSEARKLLVDSYVMLRRGDAAPGSRVAYRMTVRQLEALIRLSEAIARSHLELQVLPRHVNVAVKLLKTSVISVESSEIDLSEFDEESNNDAGGGDASGQDDAQPITAPGEPAPATSGKGLPGIRQKDLIQWYVAQQNEKNSYSSMEEVVSEVRTIKAIIQRLIDIEGHLIVVDDGMQVASGSEEAAR

Click here to download the sequence:
Link to NCBI Protein BLAST