Transcript Information: R_Transcript_120887.p1


Annotated TAIR IDAT5G60740.1
Annotated Gene NameABC transporter family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24425824-24430269 | Reverse length=1109
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2133471154871
Replicate 21.0316101360609
Replicate 31.5668385060952
Condition 2: 8 Hour
Replicate 11.4625468465599
Replicate 20.58164143517535
Replicate 31.0142518458405
Condition 3: 24 Hour
Replicate 11.437627620232
Replicate 20.7011787508565
Replicate 31.2651852420172


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_120887.p1 GENE.R_Transcript_120887~~R_Transcript_120887.p1 ORF type:3prime_partial len:1038 (+),score=163.02,ABC_tran|PF00005.23|3.5e-23 R_Transcript_120887:596-3706(+)
ATGGTATGTGTTAGTATTAGTAGTGTAATTTTAATTGTGTTATTTTTTTCCTCGTGCGTAGGCATGCTGATTGGAATTCGGCCTTCGATTTCTCCGAAAATTTGGGGGTTTTTGTCCAATTGCGTTCGTAGAACAAAAGGGGACATGCTTCGGCGCTTGTGTTCGGCAGCAGAGATCAAATTTTATTTCTCCAGTATTCTTGAAAGTGGGTCAATGGGCTTCCATTACATGAAGCTGAATAAGAACTGCAATTCAACCACTTCGCTCACTGGATGTCAGCCAGGATGGGCTTGTCGTGTTGGTAACGAGCAGCCAGTTGATTTGCGAAATTCAAAGGAGGTACCTGATAGAGCAAATGAATGCCAGCCTTGTTGTGAAGGTTTCTTCTGCCCTCATGGCCTAACGTGCATGATACCTTGCCCACTTGGTTCGTATTGTCCACTTGCTACATTTAACAAAACTACTGGCGTTTGTGACCCCTACCATTACCAGCTTCCCCAAGGGCAACCAAATCACACTTGTGGAGGAGCAGATATTTGGGCTGATATAGACAGCAGTAGAGAGGTATTCTGCTCAGCAGGATCATACTGTCCAACTACTGTCGAAAAAGTACCATGCAGTAGTGGGCATTACTGCCGAACGGGTTCCATATCTCAACTACGGTGTTTACCTATGACGAAATGTGATGCAGAAAGTGAAAATCAAAACATAACCGTCTACGGAATCTTGCTTTTTGCTGCAGTGACCTTTTCGCTTCTAATAATTTATAATTGTTCTGACCAAGTTCTTGCTACTCGGGAAAGAAGACTAGCCAAGTCGAGGGAAGCTGCTGCTAAAAGTGCAAGGGAAAATGCACAAGCACGAGACCGATGGAAGTCTGCTAAAGATGTCGCGAAAAAGCATGCTATTGGGCTGCAAAGATCAATATCACGAACATTTTCTAGGAGAAAATCTGTTAGGCAGGGGGAAGAGTACAAAGGACTTGGCCATACTAACCCTGAAACAGATGCATCTTTAAGCGCTACTGCAACTACTTCCAGTGAGGATGCATCTAAAGCTGGAAGAGGCAAAAAGGAGCCCAGTGAATTGACAAGGATAATGAAAGAAATTGAGGCGAATCCTGATAGCCAAAAAGGTTTCAACTTGGAGATTGGTGACAAGAATCTGCCAAAGAGTACAATGGCTAAGAAGTTGCAGTCCCAGAGTCAGATCTTTAAGTATGCATACGGTCAAATTGAGAAGGAAAAAGCTCTGCAAGAGCAGAATAATAACCTCACTTTTTCAGGGTTGATTTCTATGGCTACTGACATTGAAATCAGGAGGAGACCTACCCTCGAAGTTGCTTTTAATGATTTAACCCTTACTCTGAAAGGAAAAAAGCAGCATCTGATGCGGTGTGTTACTGGAAAAATTGCTCCTGGACGAGTGACAGCTGTCATGGGCCCTTCTGGAGCTGGAAAAACAACATTTCTTTCTGCTTTGGCTGGGAAGGCCACTGGCTGCACAAAGACTGGCATGATTCTTATCAATGGGAAGCCCGAATCAATACACTCATATAAAAGAATTATTGGATTTGTGCCTCAAGATGATATAGTGCATGGTAATTTGACTGTTGAGGAGAATTTGTGGTTCAGCGCACGATGTAGGCTGTCAGCAGATTTGTCGAAAGCGCAAAAGGTACTTGTTCTTGAGAGGGTCATTGAGTCATTGGGATTGCAAGCAGTAAGGGATTCCCTTGTTGGCACTGTAGAAAAGCGAGGGATCTCTGGAGGTCAAAGGAAAAGGGTTAATGTGGGATTGGAGATGGTTATGGAGCCTTCATTGTTGATCTTGGATGAACCTACATCTGGACTGGATAGTTCATCATCGCTATTGTTGCTTAAAGCACTGCGTCGTGAAGCATTGGAAGGTGTAAATATTTGTATGGTTGTTCACCAACCAAGCTACGTCTTGTTCAAGATGTTTGATGATTTGATGCTTCTGGCTAAAGGTGGTCTTATTGCATATCTGGGACCAGCAAAGAAGGTAGAAGAATACTTTGCATCACTTGGAATCACTGTCCCTGAACGTGTCGATCCTCCTGACCATTTTATTGATATCTTAGAGGGCATAGTCAAGCCAAGCTCAGATGTAAATTACAAAGAACTTCCAATGAGGTGGATGCTTCATAAAGGATACCCTGTACCACTTGATTTGCAAAGTGAGCTTGGTGCGGTGGGATCTTTGCAAGGGGATTCTAATGATGGAGAAAACTCTGGAACAGCTGGTAACAGGCAGTCTTTTGCTGGAGAGCTTTGGCAAGATCTGAAGTCAAAGGTCCAGATAAAGAAAGACCACATACGACATAATTTCTTAAAATCCAATGACCTATCAAATAGAATAACTCCTGGTATTTTCCAGCAATACCGATACTTTCTTGGAAGGGTTGGCAAACAGCGGTTAAGAGAAGCTAGAATTCAAGCTGTTGACTACCTTATTCTACTTCTGGCTGGAGCTTGTTTAGGAACGCTTGCCAAAGTGAGCGATGAGACATTTGGGGCGCTTGGCTATACTTACACGGTTATTGCAGTTTCTCTATTATGTAAAATTGCAGCCCTGAGGTCTTTTTCTCTGGATAAGTTACACTACTGGAGGGAAAGTGCTTCTGGCATGAGCAGCTTGGCTTATTTTCTTGCAAAGGACACGGTCGATCATTTCAATACAATAGTCAAGCCTTTGGTTTATTTATCAATGTTTTACTTCTTCAACAACCCTCGATCTTCAGTCTTTGAGAATTATGCAGTCCTTCTTTGTCTTTTTTACTGTGTAACTGGCATTGCCTATCTACTTGCAATCTGTCTGGAACCTGGTCCTGCTCAACTGTGGTCTGTGCTGCTTCCAGTTGTCGCAACTCTCATTGCAACACAAGACAAAGGAAGTAGATTTGTTAAAAGTCTAGAGGATTTGTGCTACCCAAAGTGGGCATTGGAGGCATTTGTAATAGCAAATGCACAAAGGTATGCTGGAGTTTGGCTGGTAACCCGTTGTGGCGCCCTGTACGAAAAAGGATACGATGTTGCTGATTGGGGTGTCTGCCTTTGCGTCCTTGTAGGTACTGGTGTAATAAGCCGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_120887.p1 GENE.R_Transcript_120887~~R_Transcript_120887.p1 ORF type:3prime_partial len:1038 (+),score=163.02,ABC_tran|PF00005.23|3.5e-23 R_Transcript_120887:596-3706(+)
MVCVSISSVILIVLFFSSCVGMLIGIRPSISPKIWGFLSNCVRRTKGDMLRRLCSAAEIKFYFSSILESGSMGFHYMKLNKNCNSTTSLTGCQPGWACRVGNEQPVDLRNSKEVPDRANECQPCCEGFFCPHGLTCMIPCPLGSYCPLATFNKTTGVCDPYHYQLPQGQPNHTCGGADIWADIDSSREVFCSAGSYCPTTVEKVPCSSGHYCRTGSISQLRCLPMTKCDAESENQNITVYGILLFAAVTFSLLIIYNCSDQVLATRERRLAKSREAAAKSARENAQARDRWKSAKDVAKKHAIGLQRSISRTFSRRKSVRQGEEYKGLGHTNPETDASLSATATTSSEDASKAGRGKKEPSELTRIMKEIEANPDSQKGFNLEIGDKNLPKSTMAKKLQSQSQIFKYAYGQIEKEKALQEQNNNLTFSGLISMATDIEIRRRPTLEVAFNDLTLTLKGKKQHLMRCVTGKIAPGRVTAVMGPSGAGKTTFLSALAGKATGCTKTGMILINGKPESIHSYKRIIGFVPQDDIVHGNLTVEENLWFSARCRLSADLSKAQKVLVLERVIESLGLQAVRDSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSLLLLKALRREALEGVNICMVVHQPSYVLFKMFDDLMLLAKGGLIAYLGPAKKVEEYFASLGITVPERVDPPDHFIDILEGIVKPSSDVNYKELPMRWMLHKGYPVPLDLQSELGAVGSLQGDSNDGENSGTAGNRQSFAGELWQDLKSKVQIKKDHIRHNFLKSNDLSNRITPGIFQQYRYFLGRVGKQRLREARIQAVDYLILLLAGACLGTLAKVSDETFGALGYTYTVIAVSLLCKIAALRSFSLDKLHYWRESASGMSSLAYFLAKDTVDHFNTIVKPLVYLSMFYFFNNPRSSVFENYAVLLCLFYCVTGIAYLLAICLEPGPAQLWSVLLPVVATLIATQDKGSRFVKSLEDLCYPKWALEAFVIANAQRYAGVWLVTRCGALYEKGYDVADWGVCLCVLVGTGVISR

Click here to download the sequence:
Link to NCBI Protein BLAST