Transcript Information: R_Transcript_12089.p1


Annotated TAIR IDAT2G07690.1
Annotated Gene NameMinichromosome maintenance (MCM2/3/5) family protein
Annotated Gene Symbol(s)MCM5
Annotation TypeOrtholog
Chromosome Positionchr2:3523379-3527388 | Reverse length=727
E-Value2.1E-267
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.627587212208
Replicate 25.7920828734615
Replicate 39.6267539466589
Condition 2: 8 Hour
Replicate 18.3906304452844
Replicate 27.566074243677
Replicate 316.665056302338
Condition 3: 24 Hour
Replicate 118.3563501756
Replicate 213.927135463231
Replicate 317.689416503419


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_12089.p1 GENE.R_Transcript_12089~~R_Transcript_12089.p1 ORF type:3prime_partial len:464 (+),score=117.56,MCM|PF00493.19|4.5e-68,MCM_N|PF14551.2|3.9e-17,MCM_N|PF14551.2|1.6e+04 R_Transcript_12089:153-1541(+)
ATGTCGGGATGGGATGAAGGAGCTGTGTACTACAGCGACCAAGCTCAGTTCCCACCTGGCCGCAATGGCGACATTAATCCTGAACAGGCAGCCAGCCGCCACTCTATCCTCGTCAAATTCAAGGAATTCATTAGGGGTTTCGAAACTGACAAGAACATCTTCCCTTATCGTGAGAGTCTGGTTCACAACCCTCCTTCTCTGCTTGTTAATCTCGAACATCTCGATGCCTTTGATCCCGATCTCCCTTCCAAGCTCCGCTCTTCTCCTGCCGACTTCCTCCCTCTTTTTGAGACTGCTGCTGCTCAAGTGTTGGCCAGTTTGAAGTCCAAAGTGGCCAGTGAGACTGGGGAGATGGAAGAGCCTTTAACTGACGATGTTCAGATTCTCCTCACCTCTAGGGAGGATCCCATCTCTATGCGCTCTCTTGGGGCTCAATATATATCAAAACTTGTGAAAATATCTGGAATAACAATAGCTGCTTCAAGGACCAAAGCCAAGGCCACTTATGTCACCTTAGTCTGTAAGAACTGTAGAAATGTCAAGTTGGTTCCTTGCCGTCCTGGTCTTGGTGGTGCTATCATTCCTCGCTCTTGTGACTTTGTTCCTCAGGCTGGTGAAGAATCTTGCCCTATTGATCCATGGCTAGTTGTTCCTGACAAAAGCAAGTATGTTGATCAACAAACTCTCAAACTCCAAGAGAATCCTGAGGATGTTCCAACTGGGGAGCTCCCTAGAAATATGCTTCTATCAGTGGATAGACATCTTGTACAAACCATTGTTCCCGGCACAAGGCTCACCGTCATGGGCATTTATAGTATTTTTCAAGCTTCTAATTCGACTTCTCATAAGGGAGCAGTTGCTATTAGACAACCCTATATAAGAGTGGTCGGTATAGAAGAAGCTAACGAGGCCAACACCCGTGGTCAATCTGCTTTCACAGCTGACGAGATTGAAGACTTCAAGAAATTTGCAGCCCAGCCTGATGCATACCAAAGCATATGCTCCAAGATTGCTCCCTCTATATATGGTCATGATGATGTGAAGAGGGCTGTTGCTTGCCTTTTGTTTGGAGGAGCAAGAAAGACTTTGCCAGATGGTGTTAGATTACGAGGTGATATCAATGTGCTGCTACTGGGAGATCCCTCTACTGCCAAATCACAGTTTCTCAAGTTTGTTGAGAAGACGGCTCCTGTAGCTGTTTATACTTCGGGTAAAGGATCATCAGCTGCTGGTCTTACAGCTTCTGTGATTCGGGACAGTGGATCGCGTGAATTTTATTTGGAAGGGGGAGCCATGGTTCTGGCTGATGGAGGTGTTGTTTGCATTGATGAGTTTGATAAAATGAGAGCAGAGGACAGGGTTGCAATTCATGAAGCCATGGAACAACAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_12089.p1 GENE.R_Transcript_12089~~R_Transcript_12089.p1 ORF type:3prime_partial len:464 (+),score=117.56,MCM|PF00493.19|4.5e-68,MCM_N|PF14551.2|3.9e-17,MCM_N|PF14551.2|1.6e+04 R_Transcript_12089:153-1541(+)
MSGWDEGAVYYSDQAQFPPGRNGDINPEQAASRHSILVKFKEFIRGFETDKNIFPYRESLVHNPPSLLVNLEHLDAFDPDLPSKLRSSPADFLPLFETAAAQVLASLKSKVASETGEMEEPLTDDVQILLTSREDPISMRSLGAQYISKLVKISGITIAASRTKAKATYVTLVCKNCRNVKLVPCRPGLGGAIIPRSCDFVPQAGEESCPIDPWLVVPDKSKYVDQQTLKLQENPEDVPTGELPRNMLLSVDRHLVQTIVPGTRLTVMGIYSIFQASNSTSHKGAVAIRQPYIRVVGIEEANEANTRGQSAFTADEIEDFKKFAAQPDAYQSICSKIAPSIYGHDDVKRAVACLLFGGARKTLPDGVRLRGDINVLLLGDPSTAKSQFLKFVEKTAPVAVYTSGKGSSAAGLTASVIRDSGSREFYLEGGAMVLADGGVVCIDEFDKMRAEDRVAIHEAMEQQ

Click here to download the sequence:
Link to NCBI Protein BLAST