Transcript Information: R_Transcript_120923.p1


Annotated TAIR IDAT1G64810.2
Annotated Gene NameArabidopsis thaliana protein of unknown function (DUF794)
Annotated Gene Symbol(s)APO1
Annotation TypeOrtholog
Chromosome Positionchr1:24086810-24088276 | Forward length=460
E-Value3.1E-206
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.0949999412901
Replicate 24.0399385624855
Replicate 34.2833736968415
Condition 2: 8 Hour
Replicate 15.44130332161
Replicate 27.5748244719463
Replicate 36.2473023002416
Condition 3: 24 Hour
Replicate 15.6616814572387
Replicate 24.243694800084
Replicate 38.067013109534


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_120923.p1 GENE.R_Transcript_120923~~R_Transcript_120923.p1 ORF type:5prime_partial len:369 (+),score=74.59,APO_RNA-bind|PF05634.7|9.7e-99,APO_RNA-bind|PF05634.7|1.7e-24 R_Transcript_120923:2-1108(+)
AGGGAGGGGCTTCCCCAGAATGTGGATCTTCCGCCTGTGTTGCCAAAGGACAAGAAGAAGCCATATCCAATCCCTATAAGAGAGATCCAAAAGAGGGCAAGGGCCGACAAGAAGCTTGCACAACTAGGTGTAGAAAAGCCACTCGAGCCTCCTAAAAACGGATTACTGGTTCCTGAACTGATTCCTGTTGCTCATGAAGTCCTAGATGCTTGGAAGGATCTGATTGAAGGTCTTGCACAGCTTTTACATGTCATTCCAGTCTATGCTTGTAGTGAGTGCTCAGAGGTTCATGTGGCTGCGACTGGCCATGAAATTCAGGACTGCCATGGCGCAAGCAGCAATAAGCGTCAAGGTTTTCACTCATGGGTCAAAGGATCAATTAATGATGTGCTCATCCCTATTGAGTCATACCATCTTTTTGACCCTTTTGGTCGGCGCATCAAGCATGAAACGAGGTTCGACTATGATCGGATCCCCGCTATTGTTGAACTCTGCATCCAAGCTGGTGTTGATTTACCTGGCTATCCCTCACGACGGAGAACCAAACCCATTCGAGTGATTGGAAAGAAAATCATCGATAGAGGTGGATTCCTTGAGGAGCCTACACCATCTCAGCCGCAAGATGCTTCCTTGCTGATAGATTACGATACTCAAGGTGCTCTCTCACGGTTTCCACCTCCTGAGCCGTCAGATTTACCTAGGTTTGCTCAAGAGACAATGGATGCCTACGAGACTGTAGCTAGGGGTTTGAGGAAGTTGATGAAGAAGTATTCTGTTAAGGCATGCGGCTATTGTCCCGAGGTTCATGTAGGTCCATGGGGCCACAATGCGAAGCTGTGTGGGGCATTTAAGCACCAATGGAGGGACGGGAAGCACGGTTGGCAAGATGCAATCATCGACGAAGTGTTCCCGCCAAATTATGTATGGCATGCTCGAGATCCTAGGGGGCCTCCTTTGAGGACTGCACTGAGGCGATTTTACGGCAAGGCTCCTGCTGTAGTTGAAGTGTGCAGGCAGGCTGGTGCTCAGGTCCCAGAGAAATATAGACCTATGATGAGACTTGATATTGTGCTCCCGGACAGTGAAGAAGCTCGCTTGGTTGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_120923.p1 GENE.R_Transcript_120923~~R_Transcript_120923.p1 ORF type:5prime_partial len:369 (+),score=74.59,APO_RNA-bind|PF05634.7|9.7e-99,APO_RNA-bind|PF05634.7|1.7e-24 R_Transcript_120923:2-1108(+)
REGLPQNVDLPPVLPKDKKKPYPIPIREIQKRARADKKLAQLGVEKPLEPPKNGLLVPELIPVAHEVLDAWKDLIEGLAQLLHVIPVYACSECSEVHVAATGHEIQDCHGASSNKRQGFHSWVKGSINDVLIPIESYHLFDPFGRRIKHETRFDYDRIPAIVELCIQAGVDLPGYPSRRRTKPIRVIGKKIIDRGGFLEEPTPSQPQDASLLIDYDTQGALSRFPPPEPSDLPRFAQETMDAYETVARGLRKLMKKYSVKACGYCPEVHVGPWGHNAKLCGAFKHQWRDGKHGWQDAIIDEVFPPNYVWHARDPRGPPLRTALRRFYGKAPAVVEVCRQAGAQVPEKYRPMMRLDIVLPDSEEARLVA*

Click here to download the sequence:
Link to NCBI Protein BLAST