Transcript Information: R_Transcript_120942.p1


Annotated TAIR IDAT1G76160.1
Annotated Gene NameSKU5 similar 5
Annotated Gene Symbol(s)sks5
Annotation TypeOrtholog
Chromosome Positionchr1:28578211-28581020 | Reverse length=541
E-Value2.8E-184
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.078162054494
Replicate 21.8014577280256
Replicate 31.287656847121
Condition 2: 8 Hour
Replicate 10.5071037119252
Replicate 20.46309518606006
Replicate 31.0740598000229
Condition 3: 24 Hour
Replicate 10.95091509227177
Replicate 20.45676571666876
Replicate 30.8418347956499


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_120942.p1 GENE.R_Transcript_120942~~R_Transcript_120942.p1 ORF type:complete len:338 (+),score=20.37,Cu-oxidase|PF00394.18|5.7e-29,Cu-oxidase|PF00394.18|3.4e+02,Cu-oxidase_2|PF07731.10|2.2e-27 R_Transcript_120942:1364-2377(+)
ATGTACTCCGAACACTTGGTAGGGAAGACATACAGATTCAGAATATCAAACGTGGGGCTTCAGAATTCACTTAACATAAGATTTGAAGGTCATAAAATGAAATTAGTGGAAGTAGAAGGGACCCACACAATGCAAGACTCTTATTCATCATTGGATGTCCACGTGGGCCAGTCATATTCTGTTTTAGTCACGGCTGATCAAGAGGTAAGAGACTACTACATTGCGGTTTCGACCCGATTCACTAATCGGATCCTTACTACCACCGCTATCCTACATTATGAGGGCTCCACAAGCCCAGTATCCGGCCCTCCCCCTGGTGGGCCCACCATAGAGATTGGCTGGTCTCTTGAGCAAGCACGAAGCATAAGGACCAATTTAACGGCAAGTGGGCCAAGACCAAATCCACAAGGGTCATACCATTACGGAGAAATCCCAGTGAAGAGGACAATAAGGCTAAGGAGTTCTGCAGGTCGAGTGGATCAAAAGCAAAGATATGCTGTCAATAGTGTTTCTTTCATTCCAGCAGATACACCACTAAAGCTAGCCGATAACTTCAACATTCCCGGTGTATTCCGCGTTGGAAGCATGCCTGATCACCCAATTGGCAAGCGCATGTACCTTGACACGGGGGTTCTTGGGGCGGATTACCGCGACTTTGTGGAGATTGTATTTGAGAACAAGGAGAAAATCGTCCAATCTTGGCACCTTGACGGCTACAACTTCTTCGTCGTAGGAATGGATGGCGGAAAATGGACACCTAAGAGCAGGTCACAGTACAATCTTCATGATGCAGTTTCACGTTGCACCACGCAAGTGTACCCAAGATCCTGGACCGCGGTGTATGTAGCATTAGATAACGTTGGTATGTGGAATATGAGGACTCAATTCTGGGCAAGGCAGTATCTTGGAGAACAATTTTACTTGAGAGTTTATACACCATCACATTCTGTCAGAGATGAATACCCCATACCTGATAACGTCATTCTATGCGGCAGGGCTCTCCGCCATGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_120942.p1 GENE.R_Transcript_120942~~R_Transcript_120942.p1 ORF type:complete len:338 (+),score=20.37,Cu-oxidase|PF00394.18|5.7e-29,Cu-oxidase|PF00394.18|3.4e+02,Cu-oxidase_2|PF07731.10|2.2e-27 R_Transcript_120942:1364-2377(+)
MYSEHLVGKTYRFRISNVGLQNSLNIRFEGHKMKLVEVEGTHTMQDSYSSLDVHVGQSYSVLVTADQEVRDYYIAVSTRFTNRILTTTAILHYEGSTSPVSGPPPGGPTIEIGWSLEQARSIRTNLTASGPRPNPQGSYHYGEIPVKRTIRLRSSAGRVDQKQRYAVNSVSFIPADTPLKLADNFNIPGVFRVGSMPDHPIGKRMYLDTGVLGADYRDFVEIVFENKEKIVQSWHLDGYNFFVVGMDGGKWTPKSRSQYNLHDAVSRCTTQVYPRSWTAVYVALDNVGMWNMRTQFWARQYLGEQFYLRVYTPSHSVRDEYPIPDNVILCGRALRHD*

Click here to download the sequence:
Link to NCBI Protein BLAST