Transcript Information: R_Transcript_121108.p1


Annotated TAIR IDAT1G64860.1
Annotated Gene Namesigma factor A
Annotated Gene Symbol(s)SIGA, SIG1, SIG2, SIGB, RPOD1
Annotation TypeOrtholog
Chromosome Positionchr1:24098497-24100746 | Forward length=502
E-Value1.5E-222
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.307588474992
Replicate 212.003860994975
Replicate 314.008702075735
Condition 2: 8 Hour
Replicate 17.8042597441419
Replicate 29.3096101689398
Replicate 39.3650740053391
Condition 3: 24 Hour
Replicate 115.183250995215
Replicate 28.8308905119642
Replicate 312.818695573601


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_121108.p1 GENE.R_Transcript_121108~~R_Transcript_121108.p1 ORF type:complete len:502 (+),score=98.62,Sigma70_r3|PF04539.12|0.027,Sigma70_r3|PF04539.12|9.6e-13,Sigma70_r3|PF04539.12|17,Sigma70_r2|PF04542.10|1.5e-16,Sigma70_r4|PF04545.12|2.6e+02,Sigma70_r4|PF04545.12|2.5e-10 R_Transcript_121108:140-1645(+)
ATGATGGCTACAGCTGCTGTCGTTGGACTAAGCGCTGGGAAAAGGCTTTTGAGTTCGTCTTTCTATTATTCTGATCTCTCCGAAAAGCTCTCCTACACGAGTGAGCAACATCAAACAGTTTCGACGAAGAATGTGATTGTTGCAAAGAAGACCTCGAATTATGCAGGAAGTTTTCAATCCAGTGGACAAAAAGAATCATCCATTAAGGCGCTTAAGGAATGTGCAGATGAAGCTACTGCTTCTCCAACAGCTGGACCCTGGATTAGTTCCAGTCCTTTAGAGGATGAAAGCTTTGAGCCCGAGACTTCATTGGAGGCACTCCTTTTGCTTCAGAAGTCTATGTTGGAAAAGCAGTTGGAGCTTTCGTTTGAACGTACTGGTATAAATGACAAATCTAGAGGGAAGACTCGAAAAGAAATGCATGTTACATCTTCAGGGATACCTGCTCGATTACGAAGGATGAACTCCAGGAAGAGAGCTCAGAGCAAATGCTTCTCTGTGAAGCAAAGTGAGAAAGAGATGGCTACTGTAAGCCCGGAGCTGCTTCAGAATCGTCTTGTTGGCTATGTGAGGGGTGTGACAAGTGATGAATTGCTGACTCATGGCCAAGTTGTGAGCTTATCTCGAAAGATTAAAACCGGTCTTTCCTTGGAGGAGCATAGATCAAGATTGAAGGAAAGACTAGGGTGTGAACCTTCTGAGGAGCAACTTGCAGTGTCCTTAAAAATGACCCGTGCTGAATTAAGGGCCAAGTTGATTGAGTGCACGCTGGCAAGAGAGAAGCTAGCTATGAGCAATGTTCGCTTGGTCATGTCAATTGCTCAGAAGTATGAGAACATGGGTGCTGATATGGCCGACCTCGTGCAGGGAGGACTCATTGGACTGCTACGGGGAATTGAGAAGTTTGATTCCTCCAAGGGCTTCAAAATTTCAACATATGTTTACTGGTGGATACGTCAGGGCGTGTCAAGAGCATTGGTAGAAAATTCAAGAACTCTTAGGTTGCCGACTCACCTACATGAAAGACTAAGTTTAATTCGCAATGCCAAAAATAGACTGGAAGAGAAGGGGATAACTCCATCTGTTGATAGAATAGCAGAGTCCTTGAACATGTCTCAAAAGAAAATTAAGAATGCAACAGAGGCTGTCAGATCTGTTTTCTCACTAGATAGAGAAGCATTTCCCTCTTTGAACGGGCTACCAGGGGAGACTTATCACAGTTACATCGCAGATAACCACCTTGAGAACAACCCGTGGCATGGTGTAGATGAATGGACACTTAAGCGTGAAGTAAACAGTCTAATAGTCACAACACTCAGGGAACGAGAGCAAGATATAATACGTTTTTATTATGGTCTTGACGACGAGTGTCTCACTTGGGAAGAAATTAGCAAAAGGATTGGTTTGTCAAGAGAAAGAGTCAGACAGGTTGGACTTGTTGCACTGGAGAAACTAAAGAATGCTGCAAGAAAGCGAAAGATGGAAGCGTTGCTGGTAAAACACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_121108.p1 GENE.R_Transcript_121108~~R_Transcript_121108.p1 ORF type:complete len:502 (+),score=98.62,Sigma70_r3|PF04539.12|0.027,Sigma70_r3|PF04539.12|9.6e-13,Sigma70_r3|PF04539.12|17,Sigma70_r2|PF04542.10|1.5e-16,Sigma70_r4|PF04545.12|2.6e+02,Sigma70_r4|PF04545.12|2.5e-10 R_Transcript_121108:140-1645(+)
MMATAAVVGLSAGKRLLSSSFYYSDLSEKLSYTSEQHQTVSTKNVIVAKKTSNYAGSFQSSGQKESSIKALKECADEATASPTAGPWISSSPLEDESFEPETSLEALLLLQKSMLEKQLELSFERTGINDKSRGKTRKEMHVTSSGIPARLRRMNSRKRAQSKCFSVKQSEKEMATVSPELLQNRLVGYVRGVTSDELLTHGQVVSLSRKIKTGLSLEEHRSRLKERLGCEPSEEQLAVSLKMTRAELRAKLIECTLAREKLAMSNVRLVMSIAQKYENMGADMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKNRLEEKGITPSVDRIAESLNMSQKKIKNATEAVRSVFSLDREAFPSLNGLPGETYHSYIADNHLENNPWHGVDEWTLKREVNSLIVTTLREREQDIIRFYYGLDDECLTWEEISKRIGLSRERVRQVGLVALEKLKNAARKRKMEALLVKH*

Click here to download the sequence:
Link to NCBI Protein BLAST