Transcript Information: R_Transcript_12122.p1


Annotated TAIR IDATMG00860.1
Annotated Gene NameDNA/RNA polymerases superfamily protein
Annotated Gene Symbol(s)ORF158
Annotation TypeHomolog
Chromosome PositionchrM:235916-236392 | Forward length=158
E-Value7E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.92072457913183
Replicate 21.5793677304295
Replicate 31.358187096409
Condition 2: 8 Hour
Replicate 10.95343190945026
Replicate 20.83111242241575
Replicate 30.73891512259982
Condition 3: 24 Hour
Replicate 11.3408984752464
Replicate 21.0539681239745
Replicate 31.3365058614123


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_12122.p1 GENE.R_Transcript_12122~~R_Transcript_12122.p1 ORF type:5prime_partial len:1130 (+),score=149.42,RVT_1|PF00078.23|6.8e-30,RVP_2|PF08284.7|1.9e-14,rve|PF00665.22|7.2e-10,Chromo|PF00385.20|2.5e-07 R_Transcript_12122:2-3391(+)
TCCTTCATTGCATCATCTTTTGTTGAGAGACATGAAATGCAACCCACGACCACCGTAGATGCTAACATAGCCATACCCTCTGGAGTCTTTGTGTCTTGCACTCTTTTGTATCAAGATGTATCCATTACTATCTCCGAGGTTAATCTACCAGCCAACCTAATTGAGTTTCCTTTAACTGATTTCGATGCTATTTTGGGCATGGACTGGCTAAGTAGGCATAGAGCTTGTATCAATTGCCCAGAACAGAAGATTACCTTAAGGGGACCGAAGGGTCAAAGAGTGTCTTACAGTGGCATTGTGACCCGAAGACGTGTGCAATTGGTGTCGAGCTTGGTTTTGCCGGCTCATTTAAAGAAAGGTTGCCCATATTATCTGTGTCATGTAGAGGATAGTCAGGAAAAGAAGCGTTTGTTAGACATACGAGTGGTAGGTGAGTATGATGACGTCTTTCCTGAAGAGTTACCAGGTATGCCACCAAAGCGAGATATTGATTTTGCTATCGAGGTAGCGCCTGGTACTGCTCCTATATCCAAAGCACCCTACAGAATGGCACCAGCAGAGATGAAAGAACTAAAGGTGCAATTAGATGAGTTGCTCGAGAAAGGTTTCATTAGGCAGAGTGTTTCGCCTTGGGGAGCACCTGTTCTTTTTGTAAAAAAGAAGGATGGCAGTATGAGACTCTGTATAGACTACAGAGAATTAAACAAGGTCACAGTGAAGAATAGATACCCATTGCCCAGGATCGACGACCTTTTTGATCAACTGCAAGGAGCCACAGTGTTTTCAAAGGTAGACCTCCGATCAGGATACCATCAGTTAAGGATCAAAGAGGAAGATATTCCTAAAACAGCTTTCAGAACGCGTTATGGTCACTATGAGTTCACAGTAATGCCTTTCGGACTGACCAACGCACCTGCAGCATTCATGGAATTAATGAACAATACCTTCAGACCTTACTTGGACAACTTTGTTGTTGTTTTCATTGATGACATCTTGGTGTACTCCAAGAATGAAGAGGAACATGAAAGACACTTAAGGATAGTCTTGGAAACCTTAAGGGAGAAACGTCTATATGCCAAATTTTCGAAGTGTGAATTTTGGCTTGAGAAGGTTGCCTTCTTGGCTCATATCATTTCCAGAGATGGTGTATCCGTCGATCCCACAAAGGTTCAAGCTGTAGCTGATTGGCCTAGACCTACAAATGTCACTGAGATACGAAGTTTCTTAGGGCTAGCAGGCTACTACAGAAGATTTGTCAAGGATTTCTCTAAGATAGCCCGACCAATCACACAGTTAATAAGGAAGTCCAACAAGTTTATTTGGAGTGATCAGTGTGAAGCTGCCTTCCAGGAGTTGAAACATCGATTGACTACAACACCTGTGCTAACATTGCCATCAGGAACCGAAGGTTTTGAGGTGTTCAGTGACGCTTCGAAGAAAGGTCTAGGGTGTGTATTGATGCAACATGGCAAAGTTGTTGCTTATGCTTCAAGACAGCTGAAGCCTTATGAGGAGAATTACCCTACTCATGACCTAGAGCTTGCGGCTGTGGTCTTTGCTCTCAAGATCTGGCGTCACTACCTTTATGGGGTTACATGCAAGATCTATACAGACCATAAGAGCCTTAAGTACCTCTTTACCCAAAAAGAAATCAACATGAGGCAAAGGAGATGGCTCGAACTCATCAAGGACTATGACTTGGAAATTCAATACCACGAAGGTAAAGCCAACATAGTCGCTGATGCTTTGAGTCGCAAAAGCTCACATTCCATGAACTCTGTCATAGTTTTGCCTAAGGAATTGGCAAGAGAACTTCAGGAAATGGGTATCGAGTTCATGCGACATGGGGCAGTAGCTGCGAAGCTCAATGCCATGACGATGCAACCAACGATCCTAGATGATATAAAAAAAGGACAACAAGGCGATGTCAAACTGCAAAGAATCAGAAAATCGAAAGAAGAAGGCCGCGCCGAGGACTTTGTAATAGATGACAATGGGCATATTCGTTACAAAGGTCGTTGGTGTGTGCCTCACATTCCAGATCTCAAAAGAAGAATTTTAGAAGAAGCTCACAATACTCCCTACTCTGTGCATCCGGGAGGTGATAAACTATATAAAGACCTCAAAAAGCATTTTTGGTGGCCCAAAATGAAAAGAGAAGTCGCTGAGTTCGTCTCCAAGTGTCTGACGTGTCAAAAGGTAAAGATTGAACACAAGAGAACTGCTGGATTATTGCAACCATTGGAAGTCCCAAGGTGGAAATGGGATGCTATATCCATGGATTTTGTCACCGCTTTACCTACCACCAAGACAGGGATGAACACTATATGGGTCATTGTTGACAGGTTGACAAAAACGACTCGTTTTGTGCCTATGAAGGATACATGGACCATGGATCAGATAGCTAGTGCTTATGTGAAGAATGTGGTCAGACTTCATGGAGTACCAAAGGAGATTGTTTCTGATCGAGATATGAGGTTTCTCTCCAACTTCTGGAAGAAATTACAAGCTGCTTTGGGAACTAAGCTTAAGTATAGCACTGCTTTCCATCCCGCCACTGATGGTCAAACAGAGAGGACCATTCAGACTTTAGAAGACATGTTGAGAGCATGTGTTTTGGAATTTCAAGGCTCGTGGGAACAACATTTATCTCTCATTGAGTTCTCGTACAACAATAGCTACCACGCAAGTATTGGGATGGCTCCATACGAAGCTCTATATGGAAGGAAGTGTAGAAGCCCTATGTGTTGGGATGACATCACAGAGACTGTACTCTTAGGCCCAGAATTGATCCAACAAACTGTTGACCTAGTGAAAGTGATTAGAGAAAAGATGAAAACTGCACAAGATAGACAGAAGAGTTATGCGGATCACGGAAGACGGCATGATGAGTTTGCTATTGGAGAAAAAGTGTTATTGAAGGTATCGCCTACTCGTGGTGTCATGCGATTTGGTAGAAAAGGAAAGTTGAGCCCCAAGTACATTGGCCCCTACGACGTTCTGGAACGTGTCGGTGAAGTTGCCTACAGGATAGCTCTACCTACTGAGTTGTCCAATGTTCATAATGTCTTCCATATCTCTCAGCTCCGGCGATATCACCATGACCCAACCCATGTTCTAAGGCCCGAAATTGTTCAGTTAGATGATAGTCTTACCTATGAAGAGCAACCTGTGAAAATCCTCGATACCAAAACCCGAGATACTCGTAGGAAGTCTATCAAGTTAGTCAAAGTTCTTTGGACAAATCATAAGACTGAAGAAGCCACTTGGGAAGTCGAGGACGATATGAGAGTTCGGTATCCCCATCTTTTTCAATCAGGTATTATCATCGCTAGTTTCGTGGACGAAACTATTTCTTTTAGGGGGGTAGAGTGTAATACCGAGTTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_12122.p1 GENE.R_Transcript_12122~~R_Transcript_12122.p1 ORF type:5prime_partial len:1130 (+),score=149.42,RVT_1|PF00078.23|6.8e-30,RVP_2|PF08284.7|1.9e-14,rve|PF00665.22|7.2e-10,Chromo|PF00385.20|2.5e-07 R_Transcript_12122:2-3391(+)
SFIASSFVERHEMQPTTTVDANIAIPSGVFVSCTLLYQDVSITISEVNLPANLIEFPLTDFDAILGMDWLSRHRACINCPEQKITLRGPKGQRVSYSGIVTRRRVQLVSSLVLPAHLKKGCPYYLCHVEDSQEKKRLLDIRVVGEYDDVFPEELPGMPPKRDIDFAIEVAPGTAPISKAPYRMAPAEMKELKVQLDELLEKGFIRQSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKVDLRSGYHQLRIKEEDIPKTAFRTRYGHYEFTVMPFGLTNAPAAFMELMNNTFRPYLDNFVVVFIDDILVYSKNEEEHERHLRIVLETLREKRLYAKFSKCEFWLEKVAFLAHIISRDGVSVDPTKVQAVADWPRPTNVTEIRSFLGLAGYYRRFVKDFSKIARPITQLIRKSNKFIWSDQCEAAFQELKHRLTTTPVLTLPSGTEGFEVFSDASKKGLGCVLMQHGKVVAYASRQLKPYEENYPTHDLELAAVVFALKIWRHYLYGVTCKIYTDHKSLKYLFTQKEINMRQRRWLELIKDYDLEIQYHEGKANIVADALSRKSSHSMNSVIVLPKELARELQEMGIEFMRHGAVAAKLNAMTMQPTILDDIKKGQQGDVKLQRIRKSKEEGRAEDFVIDDNGHIRYKGRWCVPHIPDLKRRILEEAHNTPYSVHPGGDKLYKDLKKHFWWPKMKREVAEFVSKCLTCQKVKIEHKRTAGLLQPLEVPRWKWDAISMDFVTALPTTKTGMNTIWVIVDRLTKTTRFVPMKDTWTMDQIASAYVKNVVRLHGVPKEIVSDRDMRFLSNFWKKLQAALGTKLKYSTAFHPATDGQTERTIQTLEDMLRACVLEFQGSWEQHLSLIEFSYNNSYHASIGMAPYEALYGRKCRSPMCWDDITETVLLGPELIQQTVDLVKVIREKMKTAQDRQKSYADHGRRHDEFAIGEKVLLKVSPTRGVMRFGRKGKLSPKYIGPYDVLERVGEVAYRIALPTELSNVHNVFHISQLRRYHHDPTHVLRPEIVQLDDSLTYEEQPVKILDTKTRDTRRKSIKLVKVLWTNHKTEEATWEVEDDMRVRYPHLFQSGIIIASFVDETISFRGVECNTEF*

Click here to download the sequence:
Link to NCBI Protein BLAST