Transcript Information: R_Transcript_121413.p1


Annotated TAIR IDAT5G55540.1
Annotated Gene Nametornado 1
Annotated Gene Symbol(s)TRN1, LOP1
Annotation TypeOrtholog
Chromosome Positionchr5:22496322-22500543 | Reverse length=1380
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.2921704121965
Replicate 22.2141553166278
Replicate 33.1819540951746
Condition 2: 8 Hour
Replicate 12.1725640171374
Replicate 22.0002825210661
Replicate 33.656724466798
Condition 3: 24 Hour
Replicate 13.9737877237771
Replicate 22.9834750208345
Replicate 35.6032523998457


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_121413.p1 GENE.R_Transcript_121413~~R_Transcript_121413.p1 ORF type:complete len:1375 (+),score=249.42,COR|PF16095.1|1.7e-15 R_Transcript_121413:49-4173(+)
ATGGAATCAGAACAAAACCTCAAGGACCTACAATGGGTATTGCAGGTGTTAGAATCAGGAAGCATAAGCCTACAGAATGTTTCCTTCTTTCTTTCTCATACATCTTCAGGTTGTCATCAAGAAACAGAAACCTCCATAAAAATAAACATCTCAAAGGAAAACAATGCTCTATTTCCCTACCTCCTTACAAAGCGCTCAACAATGAAAAAAAACAGCAGTACAGCTCCCTTAAGAAACTTGGAGTTCCACAGAGTTTGTTGGGAGGTTGAGTACCTCCACAGCCTTAGGTCATTGCTCGAAAACAACCCGGGGATTAAGCATATCGCGTTTCAGAGGAATTACTTCAGTTTAGACTGCTTGAAGGAGTTGTCAGAGATTCTGAAAAGGGATGAAAATGTGAAGGAAATCATGTTCTGTGAATCAAGAATTGGAACAAGAGGAACTGAGCTAATTTCTTCTGCTCTGAAGGTGAATGACAGCTTAGAAGAGCTCCAAATATGGGAAGATTCAATAGGGTTAAAAGGGTCAGAAGAGCTAGCTAAGACGATTGAAGTGAACATATCTCTGAAACTTTTGACAGTCTTTGATTTGAGCTTTATCACAGCAACGCCGTTGATATCAGCAGTTTTGGCTAGGAATAGAGAAATGGAGGTACACATTTGGAGTGGTGGGAATGGTAAAAACAGCTCAAAAGTGGTGGAATTTGTGCCTGAAAATGGGAATCTAAGGATATACAGGCTTGACATATCAGGTGCTTGCAGGGTTACATGTGCTCTGGGGATGAATACAACAGTCCGAACTCTCGACATGACAGGTGTCAGACTGAAATCACAGTGTGCAAGGGAGTTCAGATGGGTTTTAGAACAGAACAGAACTCTGAGAGAAGTGAAACTGTCAAGATGTTGTTTGAAAGATAAAGCAATAGTTTATGTATCAGCAGGGTTATTTAAGAACAGAAGCTTGGAAAGTTTGTGTGTTGATGGGAATTGGTTTAAAGGGGTTGGAGTAGAACATTTGCTTTGCCCATTAAGCAGGTTTTCACCTCTTCAATGTCAAGCAAATATTACATTGAAAAGTCTTACATTTGGTGGTGAGAAGACAAGGATAGGAAGGGAAGGGCTCGAGGCGATCCTAAGGATGATCACAACCAATCAGAGCTTGATGCGACTTGGAATTCATGATGATCAGGGCTTGAGGCCATTTGAGATTGTCACCATTTTTAAAAGTTTGGAGAAAAATGCTTCTTTGAAGTGTTTGTCTCTACAGGGTTGTAAGGGGGTTCAAGGAGAATCGGTTTTAAAGGCGATAATGGAGACTTTACAGGTGAATCCTTGGATCGAGGACATTGATCTTGATAGAACACCATTGCAAGAAGCAGGAATGACAGAAGGGATATACCAGAGATTAGGTCAGAATGCGAAGTTTGAACCAGATGAGGATTTGCTTAGAGACATGGCTATGACTACGCCTAAGAGCTGTAGGGTCTTCTTATGTGGGCAAGAATATGGAGGTAAAACCACACTCTGCAATTCGATATCTCAGAATTTTTCATCAACCAAGTTACCCTACATAGATCAAGTTCGAACACTAGTAAACCCAGTTGAGCAAGCTGTAAGATCAGAAGGGATGAAAATCAGAACCTTCAAAGATGAAGGCACAAAGATTTCTGTGTGGAATCTGGCAGGACAACATGAACTCTATTCTCTGCAAGATCTCATGTTCCCGGGGCATGGGAGTGCATCCTTTTTCCTCATCATATCGAGTTTGTTTCGAAAGCCAAGCAACAAAGAGCCTAAATCTCCGTCAGAAATTGAAGAAGACCTACAATATTGGCTTAGGTTCATAGTCTCTAATTCAAGAAGGGCAGTTCAACAATGCATGCTACCTAATGTAACCATAGTCCTTACACACAGTGACAGGATCAATCAATCCTCGGAGAACTTTCAAGCCACTGTAAACGCAATCCAGAGAGTCAGAGACAAGTTTCAAGGCTTAGTCGAATTTTATCCAACTGTATTTACAGTCGATGCAAGATCATCAGCATCAGTGAGCAAACTTTCTCAACATATAAGAAACATGAGCAAGACAATCCTACAAAGAGTTCCTCGAGTTTACGAGCTCTGCAATGATTTAGTGCAAATCCTGTCAGATTGGAGATCAGAAAACCACAACAAACCTGCTATGGCTTGGAGAGAATTCAGTGAGCTGTGCCAAGCTAAGATTCCAGCCTTGAGAGTACGTTCGAGGTCTGAGAACAAAGAAAGGACTGAAATGAGGAGGAAAGCTGTTGCTAGCTGCTTACATCATATAGGAGAGGTACTTTACTTTGAAGATCCCGGGTTCTTGATCCTAGACTGTGAATGGTTTTGTGAGGAAGTTCTTGGACAGTTAGTACGATTAAATGCTCGAAGGCAAAGCTTAATCAGGGATGGGTTCATCAGCAGGAAAGACTTGGAAAAAATTCTGAGAGGAAGTTTGCAAAGTCAGATTCCTGGGGGGGGTGGTTCTAGGTTTTTCGAGAATTTGGAGGCTAGTGATCTTGTGAGGATGATGCTCAAGTTGGAACTCTGCTATGAAAAAAACCCATCTGACCCAAATTCTCCTGTACTAATCCCTTCACTTCTCGAAAAGGGAAGACAAAAACCTCAAAAATGGCAGTTCAGCTCTTCTGATTGTGTTTATGCAGGACGCCATCTTGAATGTGATGATTCAAGCCATATGTTCCTCACTCCAGGCTTCTTTCCTCGACTGCAGGTGCATCTCCACAACAAAATCACTGCATTGAAGGAGCAGCACGGAGCAATATACAAGCTTGAAAAGTATCTCATCTCAATCAATGTCAATGGCATTGATGTTAGAGTGGAGCTCGGAGGGCAATTGGATTATTACATTGATATCTTAGCATGCTCGACCAAGAATCTAACAGAAACACTCCGGCTCATCCACCAGCTCATAATCCCTGCAATCCAGAGCCTCTGCCAAGGAGTTCTGCTGATTGAGAACATTATCCGACCAGATTGTGTAAGAAATTTAACACCTCCAAGGTACAGAAAAACCCAGTTTGTTGGACTGCAGAGAATAAAACAAGCACTTCTCTCAGTTCCAGCAGACGGCATGTATGACTATCAGCATACTTGGAGTGCAGTATCTGATGCAGGCAAATCTATCTTAAGAGCAGGCTTTGATTTTGCGAGAGACCTCCTTTCAGATGATGATTTCCGAGAAGTACTTCATCGGAGATATCATGATCTGTACAACTTGGCCAACGAACTTCAGGTCAGACCAGAAGAAATCGACAACCAAAGTGGTTCTTCCAACGAAGAACTCGACCCTAAAGTTGATCCTTCATTCAGTGGGATAGCAAAGGGAGTGGAGCAAGTGTTACAGAGGCTAAAGATCATCGAACAGGAGATAAGAGATCTGAAGCAAGAGATACAAGGGCTGAGATACTATGAGCACAGGCTCTTAATTGAACTTCACCGAAAGGTGGACCATTTAGTGAGCTACAATGTACAAATCGAAGAGCGGAAAGTGCCCAACATGTTCTTCTTTGTGAGAACAGAAAACTACTCGAGGAGACTCGTGACCAATATCATATCAGGAATGACTGCCTTGCGACTCCATATGTTATGCGAGTTCAGAAGAGAGATGCATGTAGTCGAAGACCAGATGGGGTGTGAAATTATGCAGGTTGACAACCTGGCAGTGAGATGCTTGTCACCCTACATGACCAAATTCATGAAGCTGTTAACATTCGCATTGAAAATAGGTGCACATTTAGCAACAGGAATGGGATCCATGATACCTGATTTGAGCAAGGAAGTCGCCCATTTGCTTGACTCTTCCCTTGCAACAGGAGCGGCTGGGGCAGCAGCTGCAGGGGCAGTTGGGGCAATGGCGATGGGAAGTACTGGCCGGACAAATCAAGATATTCAGCAGGATCAGAGAGCAGCACAGCAATGGGTTCTTGATTTCTTGAGGGACCGGAGGTGCTCAAGTGGGAGAGATATTGCTGAGAAGTTTGGCTTGTGGAGGGTCCGATATAGGGATACTGGCCAAGTTGCATGGATTTGCAGGAGGCACATGAGTTTAAGAGGTCATGAAATAGTTGAACTGCCCCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_121413.p1 GENE.R_Transcript_121413~~R_Transcript_121413.p1 ORF type:complete len:1375 (+),score=249.42,COR|PF16095.1|1.7e-15 R_Transcript_121413:49-4173(+)
MESEQNLKDLQWVLQVLESGSISLQNVSFFLSHTSSGCHQETETSIKINISKENNALFPYLLTKRSTMKKNSSTAPLRNLEFHRVCWEVEYLHSLRSLLENNPGIKHIAFQRNYFSLDCLKELSEILKRDENVKEIMFCESRIGTRGTELISSALKVNDSLEELQIWEDSIGLKGSEELAKTIEVNISLKLLTVFDLSFITATPLISAVLARNREMEVHIWSGGNGKNSSKVVEFVPENGNLRIYRLDISGACRVTCALGMNTTVRTLDMTGVRLKSQCAREFRWVLEQNRTLREVKLSRCCLKDKAIVYVSAGLFKNRSLESLCVDGNWFKGVGVEHLLCPLSRFSPLQCQANITLKSLTFGGEKTRIGREGLEAILRMITTNQSLMRLGIHDDQGLRPFEIVTIFKSLEKNASLKCLSLQGCKGVQGESVLKAIMETLQVNPWIEDIDLDRTPLQEAGMTEGIYQRLGQNAKFEPDEDLLRDMAMTTPKSCRVFLCGQEYGGKTTLCNSISQNFSSTKLPYIDQVRTLVNPVEQAVRSEGMKIRTFKDEGTKISVWNLAGQHELYSLQDLMFPGHGSASFFLIISSLFRKPSNKEPKSPSEIEEDLQYWLRFIVSNSRRAVQQCMLPNVTIVLTHSDRINQSSENFQATVNAIQRVRDKFQGLVEFYPTVFTVDARSSASVSKLSQHIRNMSKTILQRVPRVYELCNDLVQILSDWRSENHNKPAMAWREFSELCQAKIPALRVRSRSENKERTEMRRKAVASCLHHIGEVLYFEDPGFLILDCEWFCEEVLGQLVRLNARRQSLIRDGFISRKDLEKILRGSLQSQIPGGGGSRFFENLEASDLVRMMLKLELCYEKNPSDPNSPVLIPSLLEKGRQKPQKWQFSSSDCVYAGRHLECDDSSHMFLTPGFFPRLQVHLHNKITALKEQHGAIYKLEKYLISINVNGIDVRVELGGQLDYYIDILACSTKNLTETLRLIHQLIIPAIQSLCQGVLLIENIIRPDCVRNLTPPRYRKTQFVGLQRIKQALLSVPADGMYDYQHTWSAVSDAGKSILRAGFDFARDLLSDDDFREVLHRRYHDLYNLANELQVRPEEIDNQSGSSNEELDPKVDPSFSGIAKGVEQVLQRLKIIEQEIRDLKQEIQGLRYYEHRLLIELHRKVDHLVSYNVQIEERKVPNMFFFVRTENYSRRLVTNIISGMTALRLHMLCEFRREMHVVEDQMGCEIMQVDNLAVRCLSPYMTKFMKLLTFALKIGAHLATGMGSMIPDLSKEVAHLLDSSLATGAAGAAAAGAVGAMAMGSTGRTNQDIQQDQRAAQQWVLDFLRDRRCSSGRDIAEKFGLWRVRYRDTGQVAWICRRHMSLRGHEIVELPL*

Click here to download the sequence:
Link to NCBI Protein BLAST