Transcript Information: R_Transcript_121443.p1


Annotated TAIR IDAT5G13930.1
Annotated Gene NameChalcone and stilbene synthase family protein
Annotated Gene Symbol(s)CHS, TT4, ATCHS
Annotation TypeOrtholog
Chromosome Positionchr5:4488762-4490035 | Forward length=395
E-Value6.4E-158
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0206229839172
Replicate 20.8522483563811
Replicate 33.296541572878
Condition 2: 8 Hour
Replicate 18.4932520481219
Replicate 21.4852246241378
Replicate 33.4159857625082
Condition 3: 24 Hour
Replicate 11.7790182722575
Replicate 24.0692359576711
Replicate 33.2306575183612


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_121443.p1 GENE.R_Transcript_121443~~R_Transcript_121443.p1 ORF type:3prime_partial len:271 (+),score=9.10,Chal_sti_synt_N|PF00195.15|1.8e-114,FAE1_CUT1_RppA|PF08392.8|2.8e-07,ACP_syn_III|PF08545.6|5.2e-07 R_Transcript_121443:120-929(+)
ATGGCATCAGTAACAGTACAAGAAATATGTGACGCTCAAAAAGCCCGAGGCCCAGCCACAATCCTGGCAATTGGGACGGCAAATCCAGTGAATGAGATGTACCAGGCTGATTATCCTGACTTCTATTTTCGTGTCACCAACAGCGAACATATGACTGATCTCAAGCACAAGTTCAACCGCATGTGCGAAAGATCCATGATCAAGAAGCGTTACATGCACCTAAATGAAGATCTCCTAAAAGAGAATCCTCATTTATGCGACTACAACGCCTCATCCTTAGACACCCGCCAAGACATCCTCATCACGGAGGTCCCCAAGCTCGGCAAACAAGCCGCCGTCAAGGCCATCAAGGAGTGGGGCCAACCCCGTTCCAAGATCACCCACGTCATCTTCTGCACCACCTCCGGCCTCGACATGCCCGGGGCTGATTACCAGCTCACCAAGCTTCTCGGCCTCCGCCCTGACGTCCGCCGTTTCATGCTCTACCAACAAGGCTGCTACGCTGGCGGCACTGTCCTCCGCCTCGCCAAGGACATCGCCGAAAACAACCGTGGGGCCCGGGTTCTTGTCGTCTGTTCCGAGATCACCGTCATCTGCTTCCGCGGGCCCACCGAGACCCACCTCGACTCCATGGTGGGCCAGGCATTGTTTGGTGACGGAGCCGGGGCGGTGATCGTTGGGGCCGACCCGGATGAGTCCGTGGAGCGGCCCATCTTCCAGCTGGTCTCGGCTGCTCAGACAATCTTGCCGGACTCCGAAGGCGCCATCGACGGACACTTGCGTCAAGTGGGCTTAGCCTTCCATCTCCTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_121443.p1 GENE.R_Transcript_121443~~R_Transcript_121443.p1 ORF type:3prime_partial len:271 (+),score=9.10,Chal_sti_synt_N|PF00195.15|1.8e-114,FAE1_CUT1_RppA|PF08392.8|2.8e-07,ACP_syn_III|PF08545.6|5.2e-07 R_Transcript_121443:120-929(+)
MASVTVQEICDAQKARGPATILAIGTANPVNEMYQADYPDFYFRVTNSEHMTDLKHKFNRMCERSMIKKRYMHLNEDLLKENPHLCDYNASSLDTRQDILITEVPKLGKQAAVKAIKEWGQPRSKITHVIFCTTSGLDMPGADYQLTKLLGLRPDVRRFMLYQQGCYAGGTVLRLAKDIAENNRGARVLVVCSEITVICFRGPTETHLDSMVGQALFGDGAGAVIVGADPDESVERPIFQLVSAAQTILPDSEGAIDGHLRQVGLAFHLL

Click here to download the sequence:
Link to NCBI Protein BLAST